DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and ltb4r2b

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001295899.2 Gene:ltb4r2b / 100537296 ZFINID:ZDB-GENE-070912-658 Length:339 Species:Danio rerio


Alignment Length:328 Identity:87/328 - (26%)
Similarity:147/328 - (44%) Gaps:41/328 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NATRNEENITSFFTDEEWLAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMI 77
            |.:.:.||||:.....:.:..|.|..........:..:.|..|||.:|..::.....||.|.|:|
Zfish     5 NGSFSMENITTASPKLKSVVDNSTSATFGALILSIAILLGIPGNLFIIWSILARARKRSVTTLLI 69

  Fly    78 VNLAAADLMFVILCIPFTATDYMVYY----WPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFL 138
            :|||.||     .|:.|....:::|.    |.:|...|:.:.||.....:|||..:.|||:.|.:
Zfish    70 LNLAFAD-----GCLMFLTIFFIIYLAKQNWIFGEVLCKLLFYLCNTNMYASIMIITLMSLHRLV 129

  Fly   139 AVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYGMCTFTTNDFLG 203
            ||:.|....:.......|:.:..||:.|.::::||..       :.|:|.|........|:.   
Zfish   130 AVMWPSYLSVCTRRLTVLLVLGGLWVAVFLLAMPVLM-------FRAEKTIGNKRIVCETHH--- 184

  Fly   204 PRTYQVTF-----FISSYLLPLMIISGLYMRMIMRLWRQGTGVRMSKESQRGRKRVTRLVVVVVI 263
            .||.|..|     .:..:|:|.:||...|:.::.|| ||....||.        |...|:..:::
Zfish   185 NRTEQAVFQYTLETMVGFLVPYVIIVSSYVCILRRL-RQTKFKRMI--------RSENLIQAIIV 240

  Fly   264 AFASLWLPVQLILLLKSLDVIETNTL---TKL-----VIQVTAQTLAYSSSCINPLLYAFLSENF 320
            .|...|||..::.:::.:..:....:   |:|     ..:....|||:.|||.||:||||...::
Zfish   241 TFCIFWLPYHILNVVQVMAALTPEGMPLKTQLKNIWESSRAVTSTLAFISSCANPVLYAFAGRSY 305

  Fly   321 RKA 323
            .||
Zfish   306 IKA 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 80/302 (26%)
TM helix 1 40..66 CDD:320224 5/25 (20%)
TM helix 2 73..99 CDD:320224 10/25 (40%)
TM helix 3 111..141 CDD:320224 11/29 (38%)
TM helix 4 153..173 CDD:320224 4/19 (21%)
TM helix 5 204..233 CDD:320224 9/33 (27%)
TM helix 6 249..279 CDD:320224 6/29 (21%)
TM helix 7 292..317 CDD:320224 13/29 (45%)
ltb4r2bNP_001295899.2 7tm_GPCRs 33..310 CDD:475119 80/300 (27%)
TM helix 1 33..57 CDD:410628 5/23 (22%)
TM helix 2 66..87 CDD:410628 9/25 (36%)
TM helix 3 103..125 CDD:410628 7/21 (33%)
TM helix 4 148..164 CDD:410628 3/15 (20%)
TM helix 5 191..214 CDD:410628 5/22 (23%)
TM helix 6 232..254 CDD:410628 5/21 (24%)
TM helix 7 277..302 CDD:410628 12/24 (50%)

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