DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and ltb4r2b

DIOPT Version :9

Sequence 1:NP_001263042.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001295899.2 Gene:ltb4r2b / 100537296 ZFINID:ZDB-GENE-070912-658 Length:339 Species:Danio rerio


Alignment Length:328 Identity:87/328 - (26%)
Similarity:147/328 - (44%) Gaps:41/328 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 NATRNEENITSFFTDEEWLAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMI 77
            |.:.:.||||:.....:.:..|.|..........:..:.|..|||.:|..::.....||.|.|:|
Zfish     5 NGSFSMENITTASPKLKSVVDNSTSATFGALILSIAILLGIPGNLFIIWSILARARKRSVTTLLI 69

  Fly    78 VNLAAADLMFVILCIPFTATDYMVYY----WPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFL 138
            :|||.||     .|:.|....:::|.    |.:|...|:.:.||.....:|||..:.|||:.|.:
Zfish    70 LNLAFAD-----GCLMFLTIFFIIYLAKQNWIFGEVLCKLLFYLCNTNMYASIMIITLMSLHRLV 129

  Fly   139 AVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYGMCTFTTNDFLG 203
            ||:.|....:.......|:.:..||:.|.::::||..       :.|:|.|........|:.   
Zfish   130 AVMWPSYLSVCTRRLTVLLVLGGLWVAVFLLAMPVLM-------FRAEKTIGNKRIVCETHH--- 184

  Fly   204 PRTYQVTF-----FISSYLLPLMIISGLYMRMIMRLWRQGTGVRMSKESQRGRKRVTRLVVVVVI 263
            .||.|..|     .:..:|:|.:||...|:.::.|| ||....||.        |...|:..:::
Zfish   185 NRTEQAVFQYTLETMVGFLVPYVIIVSSYVCILRRL-RQTKFKRMI--------RSENLIQAIIV 240

  Fly   264 AFASLWLPVQLILLLKSLDVIETNTL---TKL-----VIQVTAQTLAYSSSCINPLLYAFLSENF 320
            .|...|||..::.:::.:..:....:   |:|     ..:....|||:.|||.||:||||...::
Zfish   241 TFCIFWLPYHILNVVQVMAALTPEGMPLKTQLKNIWESSRAVTSTLAFISSCANPVLYAFAGRSY 305

  Fly   321 RKA 323
            .||
Zfish   306 IKA 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_001263042.1 7tm_4 47..>164 CDD:304433 35/120 (29%)
7tm_1 55..313 CDD:278431 73/274 (27%)
ltb4r2bNP_001295899.2 7tm_1 47..298 CDD:278431 73/274 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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