DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and ghsr

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_002931618.1 Gene:ghsr / 100497774 XenbaseID:XB-GENE-484475 Length:359 Species:Xenopus tropicalis


Alignment Length:323 Identity:85/323 - (26%)
Similarity:151/323 - (46%) Gaps:51/323 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYY-WPYGRFW 110
            ::.|.|..||::.:|||....:||:||||.:.::|.:||: :.||:|........|. |.:|...
 Frog    45 LLFIIGISGNVMTMLVVSKYKDMRTTTNLYLSSMAFSDLL-IFLCMPLDLYRLWQYRPWNFGSSL 108

  Fly   111 CRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAF 175
            |:..|::.....:::|..:..:|::|:.|:..|::::::.|:....:.|..||.|..|.:.|:..
 Frog   109 CKLFQFVSECCTYSTILNITALSVERYFAICFPLKAKVVITKGRVKLVISVLWAVSFVSAGPIFV 173

  Fly   176 THDVVVDYDAKKN-------------ITYGMCTFTTNDFLGPRTYQVTFFISSYLLPLMIISGLY 227
            .  |.|:::...|             |..|:.|...      .|..:.||     ||:..::.||
 Frog   174 L--VGVEHENGTNPLDTNECKATEYAIKSGLLTIMV------WTSSIFFF-----LPVFCLTVLY 225

  Fly   228 MRMIMRLWRQ-------GTGVRMSKESQRGRKRVTRLVVVVVIAFASLWLP--VQLILLLKSLDV 283
            ..:..:|||:       .|.:|     .:..|:..:::.|||.||...|||  |...|..||   
 Frog   226 TLIGRKLWRRKRETIGPHTSIR-----DKHNKQTVKMLAVVVFAFILCWLPFHVARYLFSKS--- 282

  Fly   284 IETNTLTKLVI----QVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNCS--SRYQNYTSD 340
            .|..:|...:|    .:.:..|.|.|:.|||:||..:|:.:|.|..:.....  ||...||::
 Frog   283 FEAGSLEIALISQYCNLVSFVLFYLSAAINPILYNIMSKKYRVAACRLFRLKQVSRKATYTTN 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 80/303 (26%)
TM helix 1 40..66 CDD:320224 7/18 (39%)
TM helix 2 73..99 CDD:320224 9/25 (36%)
TM helix 3 111..141 CDD:320224 6/29 (21%)
TM helix 4 153..173 CDD:320224 5/19 (26%)
TM helix 5 204..233 CDD:320224 7/28 (25%)
TM helix 6 249..279 CDD:320224 11/31 (35%)
TM helix 7 292..317 CDD:320224 9/28 (32%)
ghsrXP_002931618.1 7tmA_GHSR 37..327 CDD:320259 80/303 (26%)
TM helix 1 37..64 CDD:320259 7/18 (39%)
TM helix 2 71..96 CDD:320259 9/25 (36%)
TM helix 3 109..139 CDD:320259 6/29 (21%)
TM helix 4 151..173 CDD:320259 6/21 (29%)
TM helix 5 202..231 CDD:320259 8/39 (21%)
TM helix 6 249..279 CDD:320259 10/29 (34%)
TM helix 7 295..320 CDD:320259 8/24 (33%)

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