DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and prlhr

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_002940396.1 Gene:prlhr / 100497660 XenbaseID:XB-GENE-994391 Length:343 Species:Xenopus tropicalis


Alignment Length:300 Identity:85/300 - (28%)
Similarity:148/300 - (49%) Gaps:46/300 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 FGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYY-----W 104
            :.::..||.|||.|:|.|:.....|.:.||.::.|||.:|::....|:|.|    :.|.     |
 Frog    41 YSLVVFTGIFGNYLLIYVICRTKKMHNVTNFLVGNLAFSDMLMCATCVPLT----LAYVFEPRGW 101

  Fly   105 PYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVV 169
            .:|.|.|..|..:..||.:.|::||.::::||:.|.|:|:|.|:  |.......:..:|::..::
 Frog   102 VFGHFLCYFVFLMQPVTVYVSVFTLTVIAVDRYHATVYPLRRRL--TIPTCAYILAGIWLLSCLM 164

  Fly   170 SVPVAFTHDVVVDYD--------------AKKNITYGMCTFTTNDFLGPRTYQVTFFISSYLLPL 220
            :.| |..|...|::.              .||.:.|...|                .|.:|.||.
 Frog   165 AAP-ALAHTYHVEFPQLDFSICEEFWFGMEKKRLAYAYST----------------LILTYALPF 212

  Fly   221 MIISGLYMRMIMRLWRQ---GTGVRMSKESQRGRKRVT-RLVVVVVIAFASLWLPVQLILLLKSL 281
            :||:..|:|:.::|..:   |....:..|..|.|::.| ||:|:||.||...|||:.:..::|.:
 Frog   213 IIIALSYLRISVKLKNRVVPGNITNVQAEWDRARRKKTFRLLVLVVGAFGMCWLPLHIFNIMKDI 277

  Fly   282 DVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFR 321
            |:...:.....::|:....||..|:|.|.||||:|.::||
 Frog   278 DIHLIDKQYFNLVQLLCHWLAMMSACTNSLLYAWLHDSFR 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 84/299 (28%)
TM helix 1 40..66 CDD:320224 8/20 (40%)
TM helix 2 73..99 CDD:320224 9/25 (36%)
TM helix 3 111..141 CDD:320224 10/29 (34%)
TM helix 4 153..173 CDD:320224 1/19 (5%)
TM helix 5 204..233 CDD:320224 8/28 (29%)
TM helix 6 249..279 CDD:320224 13/30 (43%)
TM helix 7 292..317 CDD:320224 10/24 (42%)
prlhrXP_002940396.1 7tmA_PrRP_R 35..320 CDD:320516 84/299 (28%)
TM helix 1 36..62 CDD:320516 8/20 (40%)
TM helix 2 69..94 CDD:320516 9/28 (32%)
TM helix 3 108..138 CDD:320516 10/29 (34%)
TM helix 4 149..170 CDD:320516 3/21 (14%)
TM helix 5 196..225 CDD:320516 10/44 (23%)
TM helix 6 245..275 CDD:320516 12/29 (41%)
TM helix 7 288..313 CDD:320516 10/24 (42%)

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