DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and opnpl [provisonal]

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_002934391.1 Gene:opnpl [provisonal] / 100496420 XenbaseID:XB-GENE-22168633 Length:345 Species:Xenopus tropicalis


Alignment Length:327 Identity:77/327 - (23%)
Similarity:148/327 - (45%) Gaps:46/327 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWC 111
            ::.|..||.|.|||:|.:....:||..|.::||||.|:|:..|.....:.::.:|.|:..|:..|
 Frog    38 MVVILAFFVNGLVIVVTLKYKKLRSPLNYILVNLAIANLLVTIFGSSVSFSNNVVGYFFMGKTMC 102

  Fly   112 RSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFT 176
            ....:::.:|....:::|.:::.:|:|.:..|:.....:.::..|....| |:...:.:.|..| 
 Frog   103 EFEGFMVSLTGIVGLWSLAILAFERYLVICKPMGDFRFQQKHAILGCSFT-WVWSFIWTSPPLF- 165

  Fly   177 HDVVVDYDAKKNITYGMCTFTTNDF---LGP---------RTYQVTFFISSYLLPLMIISGLYMR 229
                           |.|::.....   .||         .:|.:..|::.:::||..|...|..
 Frog   166 ---------------GWCSYVPEGLRTSCGPNWYTGGTNNNSYIMALFLTCFIMPLSTIIFSYSN 215

  Fly   230 MIMRLWRQGTGVRMSKESQRGRKRVTRLVVVVVIAFASLWLPVQ--LILLLKSLDVIETNTLTKL 292
            ::|.|.......:.|:.:||..|.|||:|:.:|:||...|||..  .:::..:.||:...|:..|
 Frog   216 LLMALRAVAAQQKDSETTQRAEKEVTRMVIAMVLAFLICWLPYASFAVVVAVNKDVVIEPTVASL 280

  Fly   293 VIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNCSSRYQNYTSDLPPPRKTSCA--RTSTT 355
            ....:.....|     ||::|.|:::.||......:.|.   :::..|     :||.|  ||..|
 Frog   281 PSYFSKTATVY-----NPIIYVFMNKQFRNCLMTLLCCG---RSFGDD-----ETSSASGRTDVT 332

  Fly   356 GL 357
            .:
 Frog   333 SV 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 69/290 (24%)
TM helix 1 40..66 CDD:320224 8/18 (44%)
TM helix 2 73..99 CDD:320224 8/25 (32%)
TM helix 3 111..141 CDD:320224 5/29 (17%)
TM helix 4 153..173 CDD:320224 3/19 (16%)
TM helix 5 204..233 CDD:320224 7/37 (19%)
TM helix 6 249..279 CDD:320224 12/31 (39%)
TM helix 7 292..317 CDD:320224 6/24 (25%)
opnpl [provisonal]XP_002934391.1 7tmA_Pinopsin 20..314 CDD:320212 69/297 (23%)
TM helix 1 31..57 CDD:320212 8/18 (44%)
TM helix 2 64..91 CDD:320212 8/26 (31%)
TM helix 3 102..132 CDD:320212 5/29 (17%)
TM helix 4 143..165 CDD:320212 4/22 (18%)
TM helix 5 190..220 CDD:320212 7/29 (24%)
TM helix 6 235..265 CDD:320212 12/29 (41%)
TM helix 7 275..300 CDD:320212 7/29 (24%)

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