DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and tacr3

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_002934808.1 Gene:tacr3 / 100486525 XenbaseID:XB-GENE-985728 Length:431 Species:Xenopus tropicalis


Alignment Length:307 Identity:83/307 - (27%)
Similarity:149/307 - (48%) Gaps:36/307 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PWIVGFF---FGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDY 99
            ||.:..:   :|.:.....|||::||.:::.:..||:.||..:||||.:|....    .|.....
 Frog    46 PWRIALWSLAYGSMVAVAVFGNIIVIWIILAHKRMRTVTNYFLVNLAFSDASMA----AFNTLVN 106

  Fly   100 MVY----YWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIV 160
            .:|    .|.:|..:||...:..:.:.|||||::..:::||::|::.|::.|:..|.  |.:.|.
 Frog   107 FIYALHNEWYFGEAYCRFHNFFPITSIFASIYSMSAIAVDRYMAIIDPLKPRLSATS--TKVVIG 169

  Fly   161 TLWIVVLVVSVPVAFTHDVVVDYDAKKNITYGMCTFTTNDFLGPRTYQVTFFISSYLLPLMIISG 225
            ::||..::::.|......:.|    .:..|..|..:...|  ...|||....:..|:|||:::..
 Frog   170 SIWIFAILLAFPQCLYSKIRV----TRTRTLCMLVWPGKD--ERLTYQFILVLLVYVLPLIVMGV 228

  Fly   226 LYMRMIMRLWR---QGTGVRMSKESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETN 287
            .|..:.:.||.   .|.......|..|.:::|.::::|||:.||..|||..:..|..:||:    
 Frog   229 TYTIVGITLWGGEIPGDTSDKYHEQLRAKRKVVKMMIVVVVTFAICWLPYHIFFLADALDI---- 289

  Fly   288 TLTKL-------VIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKA 327
               ||       .|.:....||.||:..||::|..|::.||..|.:|
 Frog   290 ---KLDRWKYIQQIYLAIFWLAMSSTMYNPIIYCCLNKRFRAGFKRA 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 80/301 (27%)
TM helix 1 40..66 CDD:320224 6/28 (21%)
TM helix 2 73..99 CDD:320224 8/25 (32%)
TM helix 3 111..141 CDD:320224 10/29 (34%)
TM helix 4 153..173 CDD:320224 4/19 (21%)
TM helix 5 204..233 CDD:320224 8/28 (29%)
TM helix 6 249..279 CDD:320224 11/29 (38%)
TM helix 7 292..317 CDD:320224 9/31 (29%)
tacr3XP_002934808.1 7tm_GPCRs 50..330 CDD:475119 79/298 (27%)
TM helix 1 52..76 CDD:320669 6/23 (26%)
TM helix 2 85..107 CDD:320669 7/25 (28%)
TM helix 3 123..145 CDD:320669 6/21 (29%)
TM helix 4 166..182 CDD:320669 3/15 (20%)
TM helix 5 208..231 CDD:320669 7/22 (32%)
TM helix 6 261..283 CDD:320669 8/21 (38%)
TM helix 7 298..323 CDD:320669 8/24 (33%)

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