DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R2 and uts2rl

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_004918484.1 Gene:uts2rl / 100486089 XenbaseID:XB-GENE-22064864 Length:359 Species:Xenopus tropicalis


Alignment Length:328 Identity:89/328 - (27%)
Similarity:158/328 - (48%) Gaps:35/328 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TDEEWLAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVIL 90
            :||  |.|.||.    |....::.::|..||:..:.|:..:....::..:.|:|||.|||:: :.
 Frog    19 SDE--LLITGTF----GTVLSLMYVSGVAGNVYTLAVMCQSVKCGASMYISIINLALADLLY-LS 76

  Fly    91 CIPFTATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENIT 155
            .|||....|....|.:|...||.:..|.::|..|||:||..|..:|::||..|: ..:.|::...
 Frog    77 SIPFIVCTYFARDWYFGDLGCRILLSLDLLTMHASIFTLTGMCTERYMAVTKPL-DTVRRSKGYR 140

  Fly   156 LIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYGMC--TFTTNDFLGPRTYQVTFFISSYLL 218
            ......:|.:.|::::|:..   :|...:.|......||  |::.:.:   |.|....|.:|.:.
 Frog   141 KGMAGAVWSLSLLLTLPMMI---MVTLTEGKGKGVKRMCAPTWSLDAY---RIYLTVLFSTSIMA 199

  Fly   219 PLMIISGLYMRMIMRLWRQGTGVRMSKESQRG-RKRVTRLVVVVVIAFASLWLPVQLILLLKSLD 282
            |.|:|..||.|:..............||::|. :::|..::..:|:.|.:.:||..:..||:..|
 Frog   200 PGMVIGYLYSRLARTYLESQRNPINKKENKRSPKQKVLIMIFSIVLLFWACFLPFWVWQLLRLYD 264

  Fly   283 VI-ETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFR-------KAFYK----------AVN 329
            :. :.::.|:..|......|.||:|||||.||..|::|:|       |.||:          .:.
 Frog   265 MSPQLSSQTQKCINYLVTCLTYSNSCINPFLYTLLTKNYREYLKNRHKKFYRFTSAFRKRGSGLQ 329

  Fly   330 CSS 332
            |||
 Frog   330 CSS 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 78/295 (26%)
TM helix 1 40..66 CDD:320224 5/25 (20%)
TM helix 2 73..99 CDD:320224 10/25 (40%)
TM helix 3 111..141 CDD:320224 12/29 (41%)
TM helix 4 153..173 CDD:320224 2/19 (11%)
TM helix 5 204..233 CDD:320224 10/28 (36%)
TM helix 6 249..279 CDD:320224 7/30 (23%)
TM helix 7 292..317 CDD:320224 11/24 (46%)
uts2rlXP_004918484.1 7tmA_UII-R 27..307 CDD:320130 78/291 (27%)
TM helix 1 27..53 CDD:320130 6/29 (21%)
TM helix 2 60..84 CDD:320130 10/24 (42%)
TM helix 3 97..127 CDD:320130 12/29 (41%)
TM helix 4 139..160 CDD:320130 3/20 (15%)
TM helix 5 185..214 CDD:320130 10/31 (32%)
TM helix 6 231..261 CDD:320130 6/29 (21%)
TM helix 7 275..300 CDD:320130 11/24 (46%)

Return to query results.
Submit another query.