DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AstA-R2 and uts2r4

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_005172122.3 Gene:uts2r4 / 100334958 ZFINID:ZDB-GENE-120215-247 Length:339 Species:Danio rerio


Alignment Length:306 Identity:86/306 - (28%)
Similarity:146/306 - (47%) Gaps:38/306 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 WI---VGFFFGVIAITGFFGNLLVILVVVFNNNMRSTT-------NLMIVNLAAADLMFVILCIP 93
            |:   :|.....:.:.|..|||..:.:      |||.|       .:.|:|||.|||:: :..||
Zfish    18 WVTPLLGATLVTMCVLGLTGNLYTLAI------MRSATLRRAGSMYVFILNLATADLLY-LGTIP 75

  Fly    94 FTATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIA 158
            |....|..:.|.:|...||.:..|.::|..||::.||.||::|:.||..|.|:|:.......::|
Zfish    76 FVVCTYFAHDWFFGEMGCRVLLSLDLLTMHASVFVLVAMSMERYRAVAAPFRARLSTARGHWMMA 140

  Fly   159 IVTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYGM----C--TFTTNDFLGPRTYQVTFFISSYL 217
            : .:||...::::|:.    |::.....:..|.|:    |  |:|...|   :.|....|.:|.|
Zfish   141 L-GIWIAAFILTLPMM----VMIRLREGRPATVGLVKRICFPTWTPEAF---KAYLTALFFTSML 197

  Fly   218 LPLMIISGLYMRMIMRLW-RQGTGVRMSKESQRGRK---RVTRLVVVVVIAFASLWLPV---QLI 275
            ||.:::.|||..:....| .|....|.|..|.|.|:   :|..::..:|:|:.:.:||.   |:.
Zfish   198 LPGLLMVGLYAGLARHYWAAQSNLARGSSSSFRRRRLKHKVVGMIFCIVVAYWACFLPFWGWQMA 262

  Fly   276 LLLKSLDVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFR 321
            .|..|..:...:......:......|.|.:||:|||||..|:.|:|
Zfish   263 KLFSSESLRSLSPAAHTYVNFFVTCLTYGNSCVNPLLYTLLTRNYR 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 86/306 (28%)
TM helix 1 40..66 CDD:320224 5/28 (18%)
TM helix 2 73..99 CDD:320224 11/32 (34%)
TM helix 3 111..141 CDD:320224 12/29 (41%)
TM helix 4 153..173 CDD:320224 3/19 (16%)
TM helix 5 204..233 CDD:320224 9/28 (32%)
TM helix 6 249..279 CDD:320224 9/35 (26%)
TM helix 7 292..317 CDD:320224 9/24 (38%)
uts2r4XP_005172122.3 7tm_GPCRs 22..311 CDD:475119 85/302 (28%)
TM helix 1 23..47 CDD:320130 6/29 (21%)
TM helix 2 57..78 CDD:320130 10/21 (48%)
TM helix 3 94..116 CDD:320130 8/21 (38%)
TM helix 4 138..154 CDD:320130 3/16 (19%)
TM helix 5 185..208 CDD:320130 8/22 (36%)
TM helix 6 239..261 CDD:320130 4/21 (19%)
TM helix 7 279..304 CDD:320130 9/24 (38%)

Return to query results.
Submit another query.