DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and cckbrb

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_017213239.2 Gene:cckbrb / 100331465 ZFINID:ZDB-GENE-201012-1 Length:442 Species:Danio rerio


Alignment Length:352 Identity:85/352 - (24%)
Similarity:158/352 - (44%) Gaps:80/352 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWC 111
            :|.:...|||||:|:|::.|..||:.||..:::||.:|||..::|:|||....::..:.:|...|
Zfish    65 LIFLLSVFGNLLIIVVLMVNKRMRTVTNSFLLSLAISDLMMAVVCMPFTLIPNLMGDFIFGAAMC 129

  Fly   112 RSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFT 176
            :.|.||:.::...|.::||.::|:|:.|:.:|::||..:|.:.....|.:.|:|..::..|... 
Zfish   130 KIVAYLMGISVCISTFSLVAIAIERYSAICNPLKSRAWQTRSHAYKVIASTWVVSFLIMTPYPI- 193

  Fly   177 HDVVVDYDAKKNITYGMCTFTTNDFLGPRTYQ--------VTFFISSYLLPLMIISGLYMRMIMR 233
            ...:|::....|||..||   .:|::.....:        |.|||...:  ::|..||..|.:.|
Zfish   194 FSTLVEFTKNNNITGHMC---RHDWMNSEVEKAWCILLLFVLFFIPGVV--MIIAYGLISRELYR 253

  Fly   234 LWRQGTGVRMSKESQRG------------------------------------------------ 250
                  |::...|.::|                                                
Zfish   254 ------GIQFELEQKKGQCGMKNGISATVLISSDDGDGCYIQVSKRPNSMEMSALTPTGSAKVDR 312

  Fly   251 ------------RKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQVTAQTLAY 303
                        :|||.|:::|:|..|...|:||..:...|:.|:...:.............|:|
Zfish   313 PRSNTSEAKLMAKKRVIRMLIVIVAMFFICWMPVYSVNTWKAFDLASAHRALSGAPISFIHLLSY 377

  Fly   304 SSSCINPLLYAFLSENFRKAFYKAVNC 330
            :|:|:||::|.|:::.||||.....:|
Zfish   378 TSACVNPIIYCFMNKRFRKALLATFSC 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 83/344 (24%)
TM helix 1 40..66 CDD:320224 8/18 (44%)
TM helix 2 73..99 CDD:320224 11/25 (44%)
TM helix 3 111..141 CDD:320224 10/29 (34%)
TM helix 4 153..173 CDD:320224 3/19 (16%)
TM helix 5 204..233 CDD:320224 8/36 (22%)
TM helix 6 249..279 CDD:320224 11/89 (12%)
TM helix 7 292..317 CDD:320224 8/24 (33%)
cckbrbXP_017213239.2 None

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