DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and kiss1r

DIOPT Version :9

Sequence 1:NP_001263042.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001163985.1 Gene:kiss1r / 100316929 XenbaseID:XB-GENE-990075 Length:366 Species:Xenopus tropicalis


Alignment Length:310 Identity:97/310 - (31%)
Similarity:159/310 - (51%) Gaps:39/310 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 WIVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYY 103
            |:|..||.::.:.|..||.|||.|:..:..||:.||..|.||||.|::|::.|:||||..|.:..
 Frog    43 WLVPLFFAMLMLVGLTGNSLVIYVISKHKQMRTVTNFYIANLAATDIIFLVSCVPFTAALYPLPG 107

  Fly   104 WPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLV 168
            |.:|.|.|:.|.|:..|:..|:..||..||:||:...|:|::|...||..:.....|.:||...:
 Frog   108 WIFGEFMCKFVNYIQQVSVQATCVTLTAMSVDRWYVTVYPLQSLRQRTPRVAAAVSVGIWIGSFI 172

  Fly   169 VSVPVAFTHDVVVDYDAKKNITYGMCTFTTNDFLGPRTY----------QVTF----FISSYLLP 219
            ||:||...:.::..|                 :.||:.|          :..|    |:..||||
 Frog   173 VSIPVPIYNQLIEGY-----------------WFGPQIYCSESFPSVSHEKAFILYNFLVVYLLP 220

  Fly   220 LMIISGLYMRMIMRLWRQGTG--------VRMSKESQRGRKRVTRLVVVVVIAFASLWLPVQLIL 276
            |:.|...|..|:.::.|....        ..:::.|:..|.:::|:|.|:|:.|...|.|:||.:
 Frog   221 LITICICYSAMVYQMGRPSVEPVDNSYQVQLLAERSELMRTKISRMVAVIVLLFTICWGPIQLYI 285

  Fly   277 LLKSLDVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYK 326
            |.::.............:::.|..::|::|.|||::|||:..||||||.|
 Frog   286 LFQAFSPSFKRDYYTYKVKIWANCMSYTNSSINPIVYAFMGANFRKAFNK 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_001263042.1 7tm_4 47..>164 CDD:304433 44/116 (38%)
7tm_1 55..313 CDD:278431 82/279 (29%)
kiss1rNP_001163985.1 7tmA_KiSS1R 43..333 CDD:320223 94/306 (31%)
TM helix 1 44..70 CDD:320223 10/25 (40%)
TM helix 2 77..103 CDD:320223 14/25 (56%)
TM helix 3 115..145 CDD:320223 11/29 (38%)
TM helix 4 157..177 CDD:320223 5/19 (26%)
TM helix 5 205..234 CDD:320223 10/28 (36%)
TM helix 6 258..288 CDD:320223 11/29 (38%)
TM helix 7 301..326 CDD:320223 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm14084
Panther 1 1.100 - - O PTHR24230
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
55.020

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