DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and adra2c

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001120375.1 Gene:adra2c / 100145449 XenbaseID:XB-GENE-5773399 Length:433 Species:Xenopus tropicalis


Alignment Length:446 Identity:93/446 - (20%)
Similarity:170/446 - (38%) Gaps:143/446 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EENITSFFTDEEWLAINGTLPWIVGFFFGVIAITGFF------GNLLVILVVVFNNNMRSTTNLM 76
            |.:.|:..|......:.|..|:.:...:.:.||.||.      ||:.|::.|:.:..:::..||.
 Frog     5 ENSTTTNSTPFPSSGVRGVWPYSMTSVWCLAAIVGFLIIFTIVGNVFVVIAVLTSRALKAPQNLF 69

  Fly    77 IVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVV 141
            :|:||:||::...|.:||:..:.::.||.:|..||.....|.|:...:||..|..:|:||:.:|.
 Frog    70 LVSLASADILVAALVMPFSLANELMGYWYFGNVWCDIYLALDVLFCTSSIVHLCAISLDRYWSVT 134

  Fly   142 HPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYGMCTFTTNDFLGPRT 206
            ..:...:.||.......|||:|::..|:|.|..    :.:|.|.:.:: |..|....:.:     
 Frog   135 QAVEYNLKRTPRRIKGIIVTVWLISAVISFPPL----ISMDRDTEDDV-YPQCKLNDDTW----- 189

  Fly   207 YQVTFFISSYLLPLMIISGLYMRM--IMRL---------------------WRQGTGVRM----- 243
            |.::..|.|:..|.:|:..:|:|:  :.:|                     :.:||.|:|     
 Frog   190 YILSSCIGSFFAPCIIMILVYIRIYQVAKLRTRTLSEKKPTRDGSSHTENGFSKGTTVKMPGDKE 254

  Fly   244 -------------------------------------------SKE------------------- 246
                                                       |||                   
 Frog   255 NGHCPPRPSPPKATDVEDLELEESSMSESKRRKSSSKEDNTDSSKERKCSKGNSFSKQSSRLSRT 319

  Fly   247 ------------------------SQRGRKRVTRLVVVVVIAFASLWLPVQLILLL-----KSLD 282
                                    ||...||.|.::.||:..|...|.|......|     ::.:
 Frog   320 SNKSMELFSSRKKKKRSSVSRRKLSQAREKRFTFVLAVVMGVFVVCWFPFFFSYSLYGICREACE 384

  Fly   283 VIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNCSSRYQNYT 338
            |.|  ||.|....:     .|.:|.:||::|...:::||::|.|.: |..|.:.:|
 Frog   385 VPE--TLFKFFFWI-----GYCNSSLNPVIYTIFNQDFRRSFKKII-CIGRRKTFT 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 83/409 (20%)
TM helix 1 40..66 CDD:320224 8/31 (26%)
TM helix 2 73..99 CDD:320224 10/25 (40%)
TM helix 3 111..141 CDD:320224 9/29 (31%)
TM helix 4 153..173 CDD:320224 6/19 (32%)
TM helix 5 204..233 CDD:320224 7/30 (23%)
TM helix 6 249..279 CDD:320224 9/34 (26%)
TM helix 7 292..317 CDD:320224 5/24 (21%)
adra2cNP_001120375.1 7tmA_alpha2C_AR 32..419 CDD:320446 83/403 (21%)
TM helix 1 33..59 CDD:320446 8/25 (32%)
TM helix 2 66..92 CDD:320446 10/25 (40%)
TM helix 3 104..134 CDD:320446 9/29 (31%)
TM helix 4 146..169 CDD:320446 7/26 (27%)
TM helix 5 187..216 CDD:320446 7/33 (21%)
TM helix 6 346..376 CDD:320446 8/29 (28%)
TM helix 7 387..412 CDD:320446 9/31 (29%)

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