DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and lpar6

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:XP_002935149.1 Gene:lpar6 / 100144921 XenbaseID:XB-GENE-6258438 Length:343 Species:Xenopus tropicalis


Alignment Length:312 Identity:79/312 - (25%)
Similarity:156/312 - (50%) Gaps:24/312 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 IVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYW 104
            :.|..|.::.:.|...|.:.:.:......:|:.|...::|||.:||:|| ..:||....::...|
 Frog    19 LYGCMFSMVFVLGLIANCVALYIFGCTLKVRNETTTYMINLAISDLLFV-FTLPFRIFYFVARNW 82

  Fly   105 PYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVV 169
            |:|...|:....|.....:.||..|..:|:|||||:|:|.:||.:||:....|..:.:|:.|:..
 Frog    83 PFGDILCKISVTLFYTNMYGSILFLTCISVDRFLAIVYPFQSRTIRTKKNAKIVCLAVWLTVIAG 147

  Fly   170 SVPVAFTHDVVVDYDAKKNITYGMCTFTTNDFLGPRTY--QVTFFIS--SYLLPLMIISGLYMRM 230
            |.|.:|...  .:.....|.......|:::.:   :||  ::..||.  .:.:|| |::.....|
 Frog   148 SAPASFFRS--TNTSTSNNTETCFENFSSDTW---KTYLSKIVIFIEIVGFFIPL-ILNVFCSTM 206

  Fly   231 IMRLWRQGTGVRMSKESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQ 295
            :::..::  .:.:|: |:..:|:|.:::||.::.|...::|..:.|:|.||  :.|.:.:...::
 Frog   207 VLKTLKR--PITLSR-SKLNKKKVLKMIVVHLMIFCFCFIPYNINLVLYSL--MRTQSFSNCSVK 266

  Fly   296 VTAQT-------LAYSSSCINPLLYAFLSENFRKAFYKAVNCSSRYQNYTSD 340
            ...:|       :|.|:.|.:|::|.|.||..:.:..|. |..||..:..||
 Frog   267 AAVRTMYPITLCIAVSNCCFDPIVYYFTSETIQNSIKKR-NRPSRKDSRYSD 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 73/294 (25%)
TM helix 1 40..66 CDD:320224 4/25 (16%)
TM helix 2 73..99 CDD:320224 10/25 (40%)
TM helix 3 111..141 CDD:320224 11/29 (38%)
TM helix 4 153..173 CDD:320224 4/19 (21%)
TM helix 5 204..233 CDD:320224 8/32 (25%)
TM helix 6 249..279 CDD:320224 7/29 (24%)
TM helix 7 292..317 CDD:320224 7/31 (23%)
lpar6XP_002935149.1 7tmA_LPAR6_P2Y5 18..302 CDD:320284 73/294 (25%)
TM helix 1 18..45 CDD:320284 4/25 (16%)
TM helix 2 52..77 CDD:320284 10/25 (40%)
TM helix 3 89..119 CDD:320284 11/29 (38%)
TM helix 4 131..153 CDD:320284 5/21 (24%)
TM helix 5 181..210 CDD:320284 6/29 (21%)
TM helix 6 222..252 CDD:320284 7/29 (24%)
TM helix 7 270..295 CDD:320284 7/24 (29%)

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