DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and ccr3

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001107334.1 Gene:ccr3 / 100135154 XenbaseID:XB-GENE-5897823 Length:345 Species:Xenopus tropicalis


Alignment Length:366 Identity:94/366 - (25%)
Similarity:166/366 - (45%) Gaps:52/366 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MENTTMLANISLNATRNEENITSFFTDEEWLAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVF 65
            :.|:||..:   ..|..:|.|....:::|.:.....   .|.||:..:......||.|::.:::.
 Frog    10 LSNSTMGFS---TTTYEDETIVYMCSNDESIKFGAA---AVPFFYYTVFTLSLLGNGLILFLLLK 68

  Fly    66 NNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLV 130
            ...:::.|||.|:||..:||:|.| .:||.|. |....|.:|...|:.|..:..:..|:.|..|.
 Frog    69 YEKIKTVTNLFILNLVISDLLFTI-TLPFWAF-YHSNEWVFGNGMCKVVSSVFFIGFFSCILFLT 131

  Fly   131 LMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYG-MC 194
            :|::||:|||||.:.:...|......:|.:.:|::..|.:||      ..|.|..:|:.:.| :|
 Frog   132 VMTMDRYLAVVHAVSAARTRKLIYVYVASIAIWVISFVSTVP------KFVLYGTRKHDSAGILC 190

  Fly   195 TFT--------TNDFLGPRTY--QVTFFISSYLLPLMIISGLYMRMIMRLWRQGTGVRMSKESQR 249
            ..|        |...||   |  |:|.|   :|.||::|...|..::::|:         .....
 Frog   191 EETGFSADKIDTWRRLG---YYQQLTMF---FLFPLIVILYCYTLIVVKLF---------NTKMH 240

  Fly   250 GRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQVTAQTLAYSSSCINPLLYA 314
            .:.:..:|:.|:|:||...|.|..:::.|:.......|........: .:.:||...||||..|.
 Frog   241 NKDKAVKLISVIVLAFFICWTPYNVVIFLRLSPGDPCNDYLNNAFYI-CRNIAYFHCCINPFFYT 304

  Fly   315 FLSENFRK--AFYKAVNCSSRYQNYTSDLPPPRKTSCARTS 353
            |:...||:  :.....||.|.::         |.:|.:|||
 Frog   305 FVGTKFRRHLSALLGTNCLSMFR---------RSSSSSRTS 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 79/297 (27%)
TM helix 1 40..66 CDD:320224 6/25 (24%)
TM helix 2 73..99 CDD:320224 13/25 (52%)
TM helix 3 111..141 CDD:320224 10/29 (34%)
TM helix 4 153..173 CDD:320224 4/19 (21%)
TM helix 5 204..233 CDD:320224 9/30 (30%)
TM helix 6 249..279 CDD:320224 7/29 (24%)
TM helix 7 292..317 CDD:320224 8/24 (33%)
ccr3NP_001107334.1 7tmA_XCR1 42..314 CDD:341337 79/298 (27%)
TM helix 1 42..69 CDD:341337 6/29 (21%)
TM helix 2 76..101 CDD:341337 13/26 (50%)
TM helix 3 112..142 CDD:341337 10/29 (34%)
TM helix 4 154..176 CDD:341337 5/27 (19%)
TM helix 5 204..233 CDD:341337 11/34 (32%)
TM helix 6 240..270 CDD:341337 7/29 (24%)
TM helix 7 282..307 CDD:341337 8/25 (32%)

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