DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and tacr1

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001106489.1 Gene:tacr1 / 100127678 XenbaseID:XB-GENE-5835469 Length:407 Species:Xenopus tropicalis


Alignment Length:339 Identity:92/339 - (27%)
Similarity:160/339 - (47%) Gaps:48/339 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NISL------NAT-RNEENITSFFTDEEW-LAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVF 65
            |||:      |:| .||..|.:.|....| :|:     |.:.  :.:|.|....||::|:.:::.
 Frog     2 NISMQNSSICNSTGGNETCIVNPFLQPAWQIAL-----WSIA--YSIIVIVSVVGNIIVMWIILA 59

  Fly    66 NNNMRSTTNLMIVNLAAADLMFVIL--CIPFTATDYMVY-YWPYGRFWCRSVQYLIVVTAFASIY 127
            :..||:.||..:||||.|:......  .|.||   |.:: :|.||..:|:...:..:...|:|||
 Frog    60 HKRMRTVTNYFLVNLAFAEASMSAFNTVINFT---YAIHNHWYYGLIYCKFHNFFPISAVFSSIY 121

  Fly   128 TLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAF------THDVVV---DY 183
            ::..:::||::|::||::.|:..|  .|.|.|..:|.....::.|..:      |.|.||   ::
 Frog   122 SMTAIALDRYMAIIHPLKPRLSAT--ATRIVIAVIWGFAFALAFPQGYFATVEPTPDRVVCYMEW 184

  Fly   184 DAKKNITYGMCTFTTNDFLGPRTYQVTFFISSYLLPLMIISGLYMRMIMRLWRQ---GTGVRMSK 245
            ...:|..:            .:.|||..|...|.|||::|...|..:.|.||..   |.......
 Frog   185 PESENRKF------------EKVYQVLLFGLIYFLPLLVIGCSYTFIGMTLWASEIPGDSSDRYH 237

  Fly   246 ESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQVTAQTLAYSSSCINP 310
            |....:::|.::::|||..||..|||..:..||:.....|:....: .:.:....|..||:..||
 Frog   238 EQVVAKRKVVKMMIVVVCTFAICWLPYHIYFLLQLFLPDESQKFYQ-QLYLGIMWLGMSSTMYNP 301

  Fly   311 LLYAFLSENFRKAF 324
            ::|..|::.||..|
 Frog   302 IIYCCLNDRFRIGF 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 80/299 (27%)
TM helix 1 40..66 CDD:320224 5/25 (20%)
TM helix 2 73..99 CDD:320224 10/27 (37%)
TM helix 3 111..141 CDD:320224 8/29 (28%)
TM helix 4 153..173 CDD:320224 4/19 (21%)
TM helix 5 204..233 CDD:320224 10/28 (36%)
TM helix 6 249..279 CDD:320224 10/29 (34%)
TM helix 7 292..317 CDD:320224 6/24 (25%)
tacr1NP_001106489.1 7tmA_NK1R 33..315 CDD:320668 81/306 (26%)
TM helix 1 34..60 CDD:320668 6/32 (19%)
TM helix 2 67..93 CDD:320668 10/28 (36%)
TM helix 3 105..135 CDD:320668 8/29 (28%)
TM helix 4 146..167 CDD:320668 5/20 (25%)
TM helix 5 193..222 CDD:320668 10/28 (36%)
TM helix 6 241..271 CDD:320668 10/29 (34%)
TM helix 7 283..308 CDD:320668 6/25 (24%)

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