DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and XB5962511

DIOPT Version :9

Sequence 1:NP_001263042.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001096443.1 Gene:XB5962511 / 100125055 XenbaseID:XB-GENE-5962512 Length:369 Species:Xenopus tropicalis


Alignment Length:314 Identity:99/314 - (31%)
Similarity:172/314 - (54%) Gaps:30/314 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PW-------------IVGFFFGVIAITGFFGNLLVILVVVFNNNMR--STTNLMIVNLAAADLMF 87
            ||             :|...|.:|.:.|..||.|| |.|:..:..|  :||||.|:||:.||:.|
 Frog    13 PWNSSDLSLFSPASIVVPVIFSLIFLLGTVGNSLV-LAVLLRSGQRTHNTTNLFILNLSVADVSF 76

  Fly    88 VILCIPFTATDYMVYYWPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTE 152
            :|.|:||.||.|.:..|.:|.|.|::|.:.|.:|.:||.:||..:|:||:||:.:|:|||.:||.
 Frog    77 IIFCVPFQATIYSLEDWVFGAFMCKAVHFFIYLTMYASSFTLAAVSVDRYLAIRYPLRSRELRTP 141

  Fly   153 NITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYGMCTFTTNDFLGPRTYQVT---FFIS 214
            ...:..:..:|.:.:|.:.|....:| ::||::......|.         ..||.::.   .||.
 Frog   142 CNAIATMAIIWGLSVVFAGPYLSYYD-LMDYESSHICMPGW---------KERTRKIMDTGTFIV 196

  Fly   215 SYLLPLMIISGLYMRMIMRLWRQGTGVRMSKESQRGRKRVTRLVVVVVIAFASLWLPVQLILLLK 279
            .|::|::|:|..|.|.|..||.....:....||::.:::||:::::|.:.|...|||..::::..
 Frog   197 GYVIPVLIVSLSYTRTIKYLWTAVDPLEDMSESKKAKRKVTKMIIIVTVLFCLCWLPHHVVVMCY 261

  Fly   280 SLDVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNCSSR 333
            .......|..| ...::.:..:||::||:||::||.:|::|||.|.|..:|..|
 Frog   262 LYGDFPFNQAT-YAFRLLSHCMAYANSCLNPIVYALVSKHFRKGFQKVFSCLLR 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_001263042.1 7tm_4 47..>164 CDD:304433 48/118 (41%)
7tm_1 55..313 CDD:278431 83/262 (32%)
XB5962511NP_001096443.1 7tmA_Gal2_Gal3_R 27..305 CDD:320225 93/289 (32%)
TM helix 1 28..54 CDD:320225 10/26 (38%)
TM helix 2 62..88 CDD:320225 15/25 (60%)
TM helix 3 100..130 CDD:320225 13/29 (45%)
TM helix 4 142..162 CDD:320225 2/19 (11%)
TM helix 5 186..215 CDD:320225 9/28 (32%)
TM helix 6 231..261 CDD:320225 7/29 (24%)
TM helix 7 273..298 CDD:320225 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 185 1.000 Domainoid score I3318
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 218 1.000 Inparanoid score I3482
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 1 1.000 - - FOG0000972
OrthoInspector 1 1.000 - - mtm14084
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.060

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