DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and rxfp3.2b

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001077348.1 Gene:rxfp3.2b / 100004589 ZFINID:ZDB-GENE-050208-346 Length:398 Species:Danio rerio


Alignment Length:368 Identity:94/368 - (25%)
Similarity:175/368 - (47%) Gaps:41/368 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NISLNA---TRNEENITSFFTDEEWLAINGTLPWIVGFFFGVIAITGFFGNLLVILVVVFN-NNM 69
            |:||..   ...:|:.::...|...||:.    .::...:.|:...|..||.|.:.::... .:.
Zfish    33 NLSLRCWLHLLTKESSSTLQGDGSSLAVR----VMIALIYSVVCALGLVGNSLALYLLHSRYRHK 93

  Fly    70 RSTTNLMIVNLAAADLMFVILCIPFTATDYMV-YYWPYGRFWCRSVQYLIVVTAFASIYTLVLMS 133
            :|:.|..::.||..||.|| |.:||.|.|..: :.||:|:..|:.:..:..:..:||::.|..||
Zfish    94 QSSINCFVMGLALTDLQFV-LTLPFWAVDTALDFRWPFGKVMCKIISSVTTMNMYASVFFLTAMS 157

  Fly   134 IDRFLAVV-----HPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVDYDAKKNITYGM 193
            :.|:.::|     |..|:.....:.|:|    .:|:|.|:.::|.|. :..:......:.:.  :
Zfish   158 VARYYSIVSSLKMHSRRAAAAAAKWISL----GIWVVSLIATLPHAI-YSTIAQVATDEELC--L 215

  Fly   194 CTFTTNDFLGPR----TYQVTFFISSYLLPLMIISGLYMRMIMR--LWRQGTGVRMSKESQ---R 249
            ..|.......|:    .||:...:..:|:||::|:..|: :::|  |.|:.:||..|:..|   :
Zfish   216 VRFPETGSWDPQLLLGLYQLQKVLLGFLIPLVVITVCYL-LLLRIVLSRRISGVAGSETEQGRHK 279

  Fly   250 GRKRVTRLVVVVVIAFASLWLPVQLILLLKSLDVIETNTLTKLVIQVTAQT------LAYSSSCI 308
            .|.:||:.|||||::|...|||.|.:.|...|...:....:|......|..      ||:::||:
Zfish   280 RRSKVTKSVVVVVLSFFLCWLPNQALTLWGVLIKFDLVPFSKAFYNAQAYAFPLTVCLAHTNSCL 344

  Fly   309 NPLLYAFLSENFRKAFYK-AVNCSSRYQNYTSDLPPPRKTSCA 350
            ||:||..:...||....: .:..:..|::....|  |||...|
Zfish   345 NPVLYCLIRREFRAGLKELLLRATPSYRSLARLL--PRKAKVA 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 81/306 (26%)
TM helix 1 40..66 CDD:320224 5/25 (20%)
TM helix 2 73..99 CDD:320224 11/25 (44%)
TM helix 3 111..141 CDD:320224 7/29 (24%)
TM helix 4 153..173 CDD:320224 5/19 (26%)
TM helix 5 204..233 CDD:320224 8/32 (25%)
TM helix 6 249..279 CDD:320224 14/29 (48%)
TM helix 7 292..317 CDD:320224 9/30 (30%)
rxfp3.2bNP_001077348.1 7tm_GPCRs 62..360 CDD:475119 81/306 (26%)
TM helix 1 64..88 CDD:410628 5/23 (22%)
TM helix 2 98..119 CDD:410628 10/21 (48%)
TM helix 3 136..158 CDD:410628 4/21 (19%)
TM helix 4 182..198 CDD:410628 5/19 (26%)
TM helix 5 231..254 CDD:410628 6/22 (27%)
TM helix 6 285..307 CDD:410628 11/21 (52%)
TM helix 7 328..353 CDD:410628 9/24 (38%)

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