DRSC/TRiP Functional Genomics Resources

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Protein Alignment AstA-R2 and kiss1rb

DIOPT Version :10

Sequence 1:NP_524544.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_001104001.1 Gene:kiss1rb / 100002715 ZFINID:ZDB-GENE-060526-54 Length:364 Species:Danio rerio


Alignment Length:303 Identity:121/303 - (39%)
Similarity:180/303 - (59%) Gaps:26/303 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 WIVGFFFGVIAITGFFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYY 103
            |:|..||.:|...|..|||:||.||:.|..|::.|||.|||||..|::|::.|:|||||.|::..
Zfish    43 WLVPLFFTLIMFVGLVGNLIVIYVVIKNQQMKTVTNLYIVNLATTDILFLVCCVPFTATVYVLPS 107

  Fly   104 WPYGRFWCRSVQYLIVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLV 168
            |.:|.|.||.|.||..|||.|:..||..||:|||...|:|::|...||..:.|....|:||...:
Zfish   108 WIFGDFMCRLVNYLQQVTAQATCITLSAMSVDRFYVTVYPLQSLHHRTPQMALSVCTTIWICSSL 172

  Fly   169 VSVPVA-FTHDVVVDYDAKKNITYGMCTFTTNDF---LGPRTYQVTFFISSYLLPLMIISGLYMR 229
            :|||:| :.|       .:.:..:|..|:.|..|   :..|.|.:..|::.|||||:.|...|..
Zfish   173 LSVPIALYQH-------TESSYWFGPQTYCTETFPSVIHKRVYLLYSFLAVYLLPLITICMCYTF 230

  Fly   230 MIMRLWR------QGTG-VRMSKESQRG---RKRVTRLVVVVVIAFASLWLPVQLILLLKSL--- 281
            |:.|:.:      ||.. :.:...|:|.   |.||:|:|||:|:.|...|.|:|:::||::.   
Zfish   231 MLKRMAQATVQPVQGCNQISLQTSSERAEAVRSRVSRMVVVMVLLFLLCWGPIQILILLQAFCAE 295

  Fly   282 DVIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAF 324
            ||..:.||.||  ::.|..::||:|.|||::|||:..||||||
Zfish   296 DVSRSYTLYKL--KIWAHGMSYSNSSINPVIYAFMGANFRKAF 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AstA-R2NP_524544.1 7tmA_AstA_R_insect 39..324 CDD:320224 119/301 (40%)
TM helix 1 40..66 CDD:320224 12/25 (48%)
TM helix 2 73..99 CDD:320224 16/25 (64%)
TM helix 3 111..141 CDD:320224 16/29 (55%)
TM helix 4 153..173 CDD:320224 6/19 (32%)
TM helix 5 204..233 CDD:320224 11/28 (39%)
TM helix 6 249..279 CDD:320224 14/32 (44%)
TM helix 7 292..317 CDD:320224 11/24 (46%)
kiss1rbNP_001104001.1 7tm_GPCRs 43..336 CDD:475119 119/301 (40%)
TM helix 1 45..69 CDD:410628 12/23 (52%)
TM helix 2 78..100 CDD:410628 12/21 (57%)
TM helix 3 116..138 CDD:410628 11/21 (52%)
TM helix 4 161..177 CDD:410628 5/15 (33%)
TM helix 5 206..229 CDD:410628 9/22 (41%)
TM helix 6 266..288 CDD:410628 9/21 (43%)
TM helix 7 304..329 CDD:410628 12/26 (46%)

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