Sequence 1: | NP_651628.1 | Gene: | snu / 43391 | FlyBaseID: | FBgn0039594 | Length: | 808 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_445954.2 | Gene: | Abcg1 / 85264 | RGDID: | 620294 | Length: | 666 | Species: | Rattus norvegicus |
Alignment Length: | 616 | Identity: | 123/616 - (19%) |
---|---|---|---|
Similarity: | 224/616 - (36%) | Gaps: | 205/616 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 35 AIISTDSAMAATNNDGG-TQPNAVAAWGAPA-------------NG------------------P 67
Fly 68 RNTQAAVSVRHAFKAYG-------KKKNANQVLNNLNMTVPKGTIYGLLGASGCGKTTLLSCIVG 125
Fly 126 RRYMDAGEIFVLGGKPGTRG----SGVPG-----KRVG-YMPQEIALYGEFSIQETMMYFGWIFG 180
Fly 181 MD--------TKEILERLQFLLNFLDLPSEKRLVKNLSGGQQRRVSFAVALMHDPELLILDEPTV 237
Fly 238 GVDPLLRQSIWNHLVHITKAGQKTVIITTHYIEEARQAHTIGLMRSGHLLAEESPSVLLSIYK-C 301
Fly 302 ISLEEVFLKLSRI-QSQ---KGDVTH-VNFSNNISLHAMAFGSKMD---KPSSSQEGGVVGLNFH 358
Fly 359 QSKEVLINDSNGSIYTLNQEPYSPPPSRRN------------NNPNDEESCQ---------DCYS 402
Fly 403 NLCKITSKGKIRALLTKNM---LRMWRNVGVMLFIFAL------PVMQVI----------LFCLA 448
Fly 449 IGRDPQGLNLAIVNGEMNDTVRENC-YWEDGCHFKNLGCRYLSHLNTSVVKTYY--EDLDDAKEA 510
Fly 511 VRKGTAWGAV--YISENFTDA--FIARANLG 537 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
snu | NP_651628.1 | LolD | 73..290 | CDD:224059 | 55/241 (23%) |
ABC_DR_subfamily_A | 74..286 | CDD:213197 | 52/236 (22%) | ||
pip_yhgE_Nterm | 427..>474 | CDD:276270 | 13/63 (21%) | ||
ABC2_membrane_3 | 429..801 | CDD:289468 | 26/132 (20%) | ||
ABC2_membrane | 601..769 | CDD:279410 | |||
Abcg1 | NP_445954.2 | 3a01204 | 60..666 | CDD:273361 | 112/562 (20%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |