DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment snu and ABCG41

DIOPT Version :9

Sequence 1:	NP_651628.1	Gene:	snu / 43391	FlyBaseID:	FBgn0039594	Length:	808	Species:	Drosophila melanogaster
Sequence 2:	NP_001329357.1	Gene:	ABCG41 / 827186	AraportID:	AT4G15215	Length:	1397	Species:	Arabidopsis thaliana

Alignment Length:	774	Identity:	157/774 - (20%)
Similarity:	266/774 - (34%)	Gaps:	262/774 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly    84 GKKKNANQVLNNLNMTVPKGTIYGLLGASGCGKTTLLSCIVGR--RYMDAGEIFVLGGKPGTRGS 146
            ||.:   |:|.::...:..|.:..|:|.||.||||||..:.||  |.:..|||.| ||.|..:.:
plant   819 GKTR---QLLFDITGALKPGVLTSLMGVSGAGKTTLLDVLSGRKTRGIIKGEIRV-GGYPKVQET 879

  Fly   147 GVPGKRV-GYMPQEIALYGEFSIQETMMYFGWI---FGMD-------TKEILERLQFLLNFLD-- 198
            ..   || ||..|........:::|::.|..|:   :.:|       .||:||.:: |.:..|
plant   880 FA---RVSGYCEQFDIHSPNITVEESLKYSAWLRLPYNIDAKTKNELVKEVLETVE-LEDIKDSM 940

  Fly   199 --LPSEKRLVKNLSGGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVHITKAGQKT 261
              ||.    :..||..|::|::.||.|:.:|.::.|||||.|:|......:...:.::.:.| :|
plant   941 VGLPG----ISGLSTEQRKRLTIAVELVSNPSIIFLDEPTTGLDARAAAIVMRAVKNVAETG-RT 1000

  Fly   262 VIITTHY--IEEARQAHTIGLMRSGHLLAEESPSVLLSIYKCISLEEVFLKLSRIQSQKGDVTHV 324
            |:.|.|.  |:.......:.||:.|..|....|....| .|.|...|....:.::|......|.:
plant  1001 VVCTIHQPSIDIFETFDELILMKDGGQLVYYGPLGKHS-SKVIKYFESIPGVPKVQKNCNPATWM 1064

  Fly   325 NFSNNISLHAMAFGSKMDKPSSSQEGGVVGLNFHQS-KEVLINDSNGSIY------TLNQEPYSP 382
                            :|....|.|.. :|::|.|: |:..:...|..:.      :|..|..|
plant  1065 ----------------LDITCKSAEHR-LGMDFAQAYKDSTLYKENKMVVEQLSSASLGSEALS- 1111

  Fly   383 PPSRRNNNPNDEESCQDCYSNLCKITSKGKIRALLTKNMLRMWRNVGVMLFIFALPVMQVILFCL 447
            .|||              ||.    |..|:::|.|.|.....|||....|        ..|:|.|
plant  1112 FPSR--------------YSQ----TGWGQLKACLWKQHCSYWRNPSHNL--------TRIVFIL 1150

  Fly   448 AIGRDPQGLNLAIVNGEMNDTVRENCYWEDGCHFKNLGCRYLSHLNTSVVKTYYEDLDDAKEAVR 512
                             :|..:....:|:                             .||
plant  1151 -----------------LNSLLCSLLFWQ-----------------------------KAK---- 1165

  Fly   513 KGTAWGAVYISENFTDAFIARANLGRDSDDETIDSSEVKVWLDMSNQQIGVMLNRDIQLAFRDFA 577
                                                      |::|||       |:      |:
plant  1166 ------------------------------------------DINNQQ-------DL------FS 1175

  Fly   578 MGLLGQCGSNPKLGDVPIQFRDPIYGTMNPSFTDFVAPGV--ILTIVFFLAVALTSSALIIERTE 640
                                   |:|:|   :|..:..|:  ..|::.|:|   |...:......
plant  1176 -----------------------IFGSM---YTIVIFSGINNCATVMNFIA---TERNVFYRERF 1211

  Fly   641 GLLDRSWVAGVSPFEILFSHVITQFVVMCGQTTLVLIFMLVVFGV-TNNGDLFW----VIVLTLL 700
            ..:..||...       ||.|:.:......|:.|..|.:..:.|. .:...:||    :....|:
plant  1212 ARMYSSWAYS-------FSQVLVEVPYSLLQSLLCTIIVYPMIGYHMSVYKMFWSLYSIFCSLLI 1269

  Fly   701 QGMCGMCFGFLISSVCELERNAIQLALGSFYPTLLLSGVIWPIEGMP---VVLRYISLCLPLTLA 762
            ...|||....|..::    ..|:.|....|....|.:|.:.|.:.:|   :.:.|:|       .
plant  1270 FNYCGMLMVALTPNI----HMALTLRSTFFSMVNLFAGFVMPKQKIPKWWIWMYYLS-------P 1323

  Fly   763 TS-SLRSILTRGWAILESDV---------------YIGYVSTLSWIVGFLVLTLLVLRA 805
            || .|..:|:..:..:|.::               |.||......:|.|:::...::.|
plant  1324 TSWVLEGLLSSQYGDVEKEITVFGEKKSVSAFLEDYFGYKHDSLAVVAFVLIAFPIIVA 1382

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
snu	NP_651628.1	LolD	73..290	CDD:224059	67/224 (30%)
		ABC_DR_subfamily_A	74..286	CDD:213197	66/220 (30%)
		pip_yhgE_Nterm	427..>474	CDD:276270	6/46 (13%)
		ABC2_membrane_3	429..801	CDD:289468	58/397 (15%)
		ABC2_membrane	601..769	CDD:279410	37/178 (21%)
ABCG41	NP_001329357.1	None

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000