Sequence 1: | NP_651628.1 | Gene: | snu / 43391 | FlyBaseID: | FBgn0039594 | Length: | 808 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006233707.2 | Gene: | Abca2 / 79248 | RGDID: | 620238 | Length: | 2435 | Species: | Rattus norvegicus |
Alignment Length: | 335 | Identity: | 86/335 - (25%) |
---|---|---|---|
Similarity: | 150/335 - (44%) | Gaps: | 59/335 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 67 PRNTQAAVSVRHAFKAYGKKKNANQVLNNLNMTVPKGTIYGLLGASGCGKTTLLSCIVGRRYMDA 131
Fly 132 GEIFVLGGKPGTRGSGVPGKRVGYMPQEIALYGEFSIQETMMYFGWIFGMDTKEILERLQFLLNF 196
Fly 197 LDLPSEKR--LVKNLSGGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVHITKAGQ 259
Fly 260 KTVIITTHYIEEA-RQAHTIGLMRSGHLLAEESPSVLLSIYKCISLEEVFLKLSRIQSQKGDVTH 323
Fly 324 VNFSNNISLHAMAFGSKMDKPSSSQEGGVVG-------------------LNFHQSKEVLINDSN 369
Fly 370 GSI-YTLNQE 378 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
snu | NP_651628.1 | LolD | 73..290 | CDD:224059 | 68/219 (31%) |
ABC_DR_subfamily_A | 74..286 | CDD:213197 | 67/214 (31%) | ||
pip_yhgE_Nterm | 427..>474 | CDD:276270 | |||
ABC2_membrane_3 | 429..801 | CDD:289468 | |||
ABC2_membrane | 601..769 | CDD:279410 | |||
Abca2 | XP_006233707.2 | rim_protein | 1..2369 | CDD:130324 | 86/335 (26%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |