Protein Alignment snu and Abca14

DIOPT Version :9

• Sequence 1: NP_651628.1
• Gene: snu / 43391
• FlyBaseID: FBgn0039594
• Length: 808
• Species: Drosophila melanogaster
• Sequence 2: XP_038957098.1
• Gene: Abca14 / 365362
• RGDID: 1561491
• Length: 1691
• Species: Rattus norvegicus
• Alignment Length: 867
• Identity: 193/867 - (22%)
• Similarity: 333/867 - (38%)
• Gaps: 217/867 - (25%)

  Fly    67 PRNTQAAVSVRHAFKAYGKKKNANQVLNNLNMTVPKGTIYGLLGASGCGKTTLLSCIVGRRYMDA 131
            |.:.:|.:.::|.:|.:..|.:....:.:|::.:.:|.|..|||.:|.||||.||.:.|......
  Rat   524 PVDLEAGIQIQHLYKEFTLKNSTLMAVKDLSLNLYEGQITVLLGHNGAGKTTTLSILTGLYLPTK 588

  Fly   132 GEIFVLGGKPGTRGSGVPGKRVGYMPQEIALYGEFSIQETMMYFGWIFGM-DTKEILERLQFLLN 195
            |::::.|....:....| .|.:|..||:..|:...::.|.:.::..|.|: .|....|..:.|.:
  Rat   589 GKVYISGYDISSDMVQV-RKSLGLCPQDDLLFPLLTVSEHLYFYCVIKGISSTNRPREIHRMLTS 652

  Fly   196 FLDLPSEKRLVKNLSGGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVHITKAGQK 260
            |..|.....:.|:||||.:|::|..:||:.|.:::||||||.|:||:.|::||:.|.|..|  .:
  Rat   653 FGLLQKSNTMSKDLSGGMKRKLSIIIALIGDTKVVILDEPTSGMDPVSRRAIWDLLQHYKK--DR 715

  Fly   261 TVIITTHYIEEARQAHTIGLMRSGHLLAEESPSVLLSIYKCISLEEVFLK-----------LSRI 314
            |:::|||:::||            .:|.:....:::.:.||.. ..:|||           :...
  Rat   716 TILLTTHHMDEA------------DVLGDRIAILVMGVLKCCG-SSLFLKKLYGVGYHLVIVKTP 767

  Fly   315 QSQKGDVTHV------------NFSNNISL-----HAMAFGSKM-DKPSSSQEGGV--VGLNFHQ 359
            .|..|.::.:            |.:..:|.     |...|.... |.....:|.|:  .|::...
  Rat   768 DSDDGKISQLIKNYIPTAEMETNVAAELSFILPKEHTHRFAELFTDLEERQEELGISGFGVSMTT 832

  Fly   360 SKEVLINDSNGSIYTLNQE------PYSPPPSRRNNNPNDEESCQ-DCYSNLCKITS-------- 409
            ..||....||.:...||.|      ..:|..|..|.|.|...:.: ..||.....:|
  Rat   833 MDEVFFKVSNLADLKLNTEIAQSASTVNPSTSENNENMNVPRNFERSGYSGRYSDSSFNAGWPLY 897

  Fly   410 KGKIRALLTKNMLRMWRNVGVMLFIFALPVMQVILFCLAIGRDPQGLNLAIVNGEMNDTVRENC- 473
            ..:.||:..|.::..|||..::|           |..||:    |||...::.|......:|..
  Rat   898 MQQFRAMFIKRVMFSWRNWKLLL-----------LQLLAL----QGLTYVLIKGIGFSVPKEPAR 947

  Fly   474 ------YWEDGCHFKNLGCRYLSHLNTSVVKTYYEDLDDAKEAVRKGTAWGAVYISENFTDAFIA 532
                  |.|....|...|.   ..|...:.|.....|.|.|:.|.:.......|:..|
  Rat   948 VMDLEQYGETTVPFSVSGD---PPLTQKLTKNLEIMLKDKKQKVHEVQGGVQDYLLTN------- 1002

  Fly   533 RANLGRDSDDETIDSSEVKVWLDMSNQQ--IGVMLNRD------IQLAFRDFAMGLLGQCGSNPK 589
                     .:.|.|..|...||::.::  .....|.:      :.|:..|   .::.:..|.|
  Rat  1003 ---------KDCIYSCIVAFSLDVTRKEKTFTFWFNNEAYHASPLSLSILD---NIIFKYLSGP- 1054

  Fly   590 LGDVPIQFRDPIYGTMNPSFTDFV--------APG--VILTIVFFLAVALTSSAL--IIERTEGL 642
              |..|...:      .|....|.        |.|  ::..::|.:::..:...|  :.||....
  Rat  1055 --DATITVSN------KPQPQPFTKGRSEERSASGIQIVFNLLFGMSIFTSGFCLMTVTERVSKA 1111

  Fly   643 LDRSWVAGVSPFEILFSHVITQFV---VMCGQTTLVLIFM-------------------LVVFGV 685
            ....:|:||.......|.::...:   |.|  ..|:|:|:                   |::||.
  Rat  1112 KHIQFVSGVYTLNFWLSALLWDLIIHFVAC--VLLLLVFLYTDVHILLENYNFLDTMLILMLFGW 1174

  Fly   686 T------------NNGDLFWVIVLTLLQGMCGMCFGF---LISSVCEL----ERNAIQLALGSFY 731
            :            ||....::.:...     ..|.||   ::.:|.||    :.:...|.|.|.
  Rat  1175 SIIPFIYLLSFWYNNSTNAYIKIFVF-----NHCLGFMSIIVDAVVELIPDIKTSTKNLILNSL- 1233

  Fly   732 PTLLLSGVIWPIE--GMPVVLRYIS------LCLPLTLATSSLRSILTRGWAILESDVY------ 782
              |||     ||.  ||. :.:|.|      ||       |||.|:.|......|..||
  Rat  1234 --LLL-----PIYNFGMS-IFKYYSIQEIRKLC-------SSLGSLNTFSGCQHELTVYSMDKRA 1283

  Fly   783 IG-YVSTL--SWIVGFLVLTLL 801
            || :|:.:  :.::.||.:.||
  Rat  1284 IGRHVTAMAATGLIYFLFIILL 1305

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snu	NP_651628.1	LolD	73..290	CDD:224059	65/217 (30%)
		ABC_DR_subfamily_A	74..286	CDD:213197	64/212 (30%)
		pip_yhgE_Nterm	427..>474	CDD:276270	10/53 (19%)
		ABC2_membrane_3	429..801	CDD:289468	88/456 (19%)
		ABC2_membrane	601..769	CDD:279410	45/228 (20%)
Abca14	XP_038957098.1	rim_protein	<100..1681	CDD:130324	193/867 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910