DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment snu and Eato

DIOPT Version :9

Sequence 1:NP_651628.1 Gene:snu / 43391 FlyBaseID:FBgn0039594 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_001036360.1 Gene:Eato / 34783 FlyBaseID:FBgn0028539 Length:1597 Species:Drosophila melanogaster


Alignment Length:806 Identity:178/806 - (22%)
Similarity:303/806 - (37%) Gaps:216/806 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 PRNTQAAVSVRHAFKAYGKKKNANQVLNNLNMTVPKGTIYGLLGASGCGKTTLLSCIVGRRYMDA 131
            ||.|.|.: :....|.:...|....:.:|||||:....|..|||.:|.||||:::.|:|....|:
  Fly   455 PRGTHAII-ITELCKKFQTSKRDTLISDNLNMTINNKEITVLLGHNGAGKTTMMNMIMGLVPKDS 518

  Fly   132 GEIFVLGGKPGTRGSGVPGKR--VGYMPQEIALYGEFSIQETMMYFGWIFGMDTKEILERLQFLL 194
            |:|.|...:      .|...|  :|:.||........:..:.:.:|..:.|....:..:.....|
  Fly   519 GKIIVCSER------DVASYRHLIGFCPQHSVFMSYMTCHQHLEFFAQLRGACRSDARDWADEKL 577

  Fly   195 NFLDLPSEKR--LVKNLSGGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVHITKA 257
            ..|.| |:||  ..||||||.:||:|..:|:..:.:::|||||:.|:|...|:.:|:.|:::.| 
  Fly   578 KKLGL-SDKRNEFGKNLSGGMKRRLSLGIAIAGNTKIVILDEPSSGLDINSRRELWDILLNLRK- 640

  Fly   258 GQKTVIITTHYIEEAR-QAHTIGLMRSGHLLAEESPSVL-----------LSIYKCISLE----E 306
             :|.|::||||:|||. ...||.::.:|.|.:..||..|           |.|....|.|    |
  Fly   641 -EKAVLVTTHYMEEAEVLGDTICILANGKLQSIGSPLELKRKSGIGYRLKLEINDFTSREVEIME 704

  Fly   307 V---FLKLSRIQSQKGDVTHVNFSNNISL---HAMAFGSKMDK-PSSSQEGGV--VGLNFHQSKE 362
            :   |:..:|:      :..||.:..|.|   :...|...:.: .:.|:|.|:  :.:.....::
  Fly   705 IIHHFVPTARV------LNVVNPTVYICLPYAYKNCFAQMLYRLETESKELGIHTISMTDTSLED 763

  Fly   363 VLINDSNGSIYTLNQEPYSPPPSRRNNNPNDEESCQDCYSNLCKITSKGKIRALLTKNM---LRM 424
            |.:..:.      .|:....|...||:.|        ..::..::......|.|....|   .:.
  Fly   764 VFLRCAG------EQDQVDTPDGSRNDAP--------LLAHYKRLQDHPPHRGLFQLWMAVFYKK 814

  Fly   425 WRNVG-------VMLFIFALPVMQVILFCLAIGRDPQGLNLAIVNGEMNDTVRENCYWEDGCHFK 482
            |..:.       :||.|..:.|...||...|:                  ::.||   |:....|
  Fly   815 WTFISNEWLYTLIMLCIPFVCVFGAILVMHAM------------------SLVEN---EEALPLK 858

  Fly   483 NLGCRYLSHLNTSVVKTYYEDLDDA--KEAVRKGTAWGAVYISENFTDAFIARANLGRDSDDETI 545
                  ||.:.:.|:..:......|  ::.:|:       .|..|...|.........|..:|::
  Fly   859 ------LSQMGSGVIYVHNPTGHHAHLEQQLRQ-------QIELNGITAKTMHLRGSNDVKNESL 910

  Fly   546 DSSEVKVWLDMSNQQIGVMLNRDIQLAFRDFAMGLLGQCGSNPKLGDVPIQFRDPIYGTMNPSFT 610
            |                  |.||....|.:..:|::...|......|.|                
  Fly   911 D------------------LQRDNLADFLEQVIGIIDMYGGGRGTSDTP---------------- 941

  Fly   611 DFVAPGVILTIVFFLA----------VALTSSALI-IERTEGLLD------RSWVAGVSPFEILF 658
                     ||..|.:          :.|..||:: :.|.|..:|      |.:|:.:||..:.:
  Fly   942 ---------TIEIFYSGNRYHSSVELINLVDSAMLKLGRPESEIDTTYVPIRRFVSDISPSRLEY 997

  Fly   659 SHVITQFVVMCGQTTLVLIFMLVVFGVTNNGDLFWVIVLTLLQGMCGMCFGF--------LISSV 715
            ..||    |..|....:..|:.:.|....||       ...||.|....:.|        ::..|
  Fly   998 YAVI----VPIGMFFFMFYFISLPFREYANG-------FKQLQTMSRFTYWFAHFTFDMLILIFV 1051

  Fly   716 CELERNAIQLALGSFYPTLLLSGVIWPIEGMPVVLR---YISLCLPLTLAT-SSLRSILTRGWAI 776
            |        :||.|....::.|.:....|...:||.   |....||:..|. ::.:||.|     
  Fly  1052 C--------VALFSLQSLMMPSELYTTAELKVIVLSIFFYGCSYLPILYALGNNFKSIST----- 1103

  Fly   777 LESDVYIGYVSTLSWIVGFLVLTLLV 802
                     :||      :|:|.|:|
  Fly  1104 ---------IST------YLLLMLIV 1114

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snuNP_651628.1 LolD 73..290 CDD:224059 69/221 (31%)
ABC_DR_subfamily_A 74..286 CDD:213197 68/216 (31%)
pip_yhgE_Nterm 427..>474 CDD:276270 9/53 (17%)
ABC2_membrane_3 429..801 CDD:289468 75/409 (18%)
ABC2_membrane 601..769 CDD:279410 38/196 (19%)
EatoNP_001036360.1 ABC2_membrane_3 <209..347 CDD:289468
CcmA 460..767 CDD:224054 89/322 (28%)
ABC_subfamily_A 461..679 CDD:213230 71/227 (31%)
ABC2_membrane_3 <937..1117 CDD:289468 49/242 (20%)
ABC_subfamily_A 1255..1479 CDD:213230
drrA 1262..1573 CDD:130256
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46598
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.810

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