Protein Alignment snu and Abcg4

DIOPT Version :9

• Sequence 1: NP_651628.1
• Gene: snu / 43391
• FlyBaseID: FBgn0039594
• Length: 808
• Species: Drosophila melanogaster
• Sequence 2: NP_001100286.2
• Gene: Abcg4 / 300664
• RGDID: 1305840
• Length: 646
• Species: Rattus norvegicus
• Alignment Length: 823
• Identity: 166/823 - (20%)
• Similarity: 271/823 - (32%)
• Gaps: 296/823 - (35%)

  Fly    33 PSAIISTDSAMAATNNDGGTQP----------NAVAAWGAPANGPRNTQAAVSVRHAFKAYG--- 84
            |.|:     |||....||...|          |.:......::.|:  ::||.:.....:|.
  Rat    15 PGAV-----AMAVALEDGAEPPVLTTHLKKVENHITEAQRFSHLPK--RSAVDIEFVELSYSVRE 72

  Fly    85 ----KKKNANQVLNNLNMTVPKGTIYGLLGASGCGKTTLLSCIVGRRYMD-AGEIFVLGGKPGTR 144
                :|:....:|..|:....:..:.|::|.||.||:|.::.:.|.|... .|:|.| .|:|  |
  Rat    73 GPCWRKRGYKTLLKCLSGKFCRRELIGIMGPSGAGKSTFMNILAGYRESGMKGQILV-NGRP--R 134

  Fly   145 GSGVPGKRVGYMPQEIALYGEFSIQETMMYFGWIFGMDTKEILERL-QFLLNFLDLPS-EKRLVK 207
            ......|...|:.|:..|....::.|.||....:...:.:|:.:.| ..:|..|.|.| ......
  Rat   135 DLRTFRKMSCYIMQDDMLLPHLTVLEAMMVSANLKLSEKQEVKKELVTEILTALGLMSCSHTRTA 199

  Fly   208 NLSGGQQRRVSFAVALMHDPELLILDEPTVGVDP---LLRQSIWNHLVHITKAGQKTVIITTHYI 269
            .|||||::|::.|:.|:::|.::..||||.|:|.   ....|:...|.|    |.:|||.|.|
  Rat   200 LLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAH----GGRTVICTIH-- 258

  Fly   270 EEARQAHTIGLMRSGHLLAEESPSVLLSIYKCISLEEVFLKLSRIQSQ-----KGDVTH-VNFSN 328
                                 .||.        .|.|:|.|| .|.||     ||.||: :.:..
  Rat   259 ---------------------QPSA--------KLFEMFDKL-YILSQGQCIFKGVVTNLIPYLK 293

  Fly   329 NISLHAMAFGSKMDKPSSSQEGGVVGLNFHQSKEVLINDSNGSIYTLNQEPYSPPPSRRNNNPND 393
            .:.||...:.:..|.......|....||     .:|.......:.|:.::..||   .:|..|
  Rat   294 GLGLHCPTYHNPADFIIEVASGEYGDLN-----PMLFRAVQNGLCTMAEKKSSP---EKNEVP-- 348

  Fly   394 EESCQDCYSNLCKITSKGKIRALLTKNMLRMWRNVGVMLFIFALPVMQVILFCLAIGRDPQGLNL 458
             ..|..|...|..|.|.....:.||:                         ||:...|    ..|
  Rat   349 -AHCPTCPPELDPIESHTFATSTLTQ-------------------------FCILFRR----TFL 383

  Fly   459 AIVNGEMNDTVRENCYWEDGCHFKNLGCRYLSHLNTSVVKTYYEDLDDAKEAVRKGTAWGAVYIS 523
            :|    :.|||..:             .|::||                   |..|...|.:|:
  Rat   384 SI----LRDTVLTH-------------LRFMSH-------------------VLIGVLIGLLYL- 411

  Fly   524 ENFTDAFIARANLGRDSDDETIDSSEVKVWLDMSNQQIGVMLNRDIQLAFRDFAMGLLGQCGSNP 588
                       ::|.|:.         ||:.:               ..|..|:|..|
  Rat   412 -----------HIGDDAS---------KVFNN---------------TGFLFFSMLFL------- 434

  Fly   589 KLGDVPIQFRDPIYGTMNPSFTDFVAPGVILTIVFFLAVAL--------TSSALIIERTEGLLDR 645
                        ::..:.|:         :||....:||.:        :..|..:.:|
  Rat   435 ------------MFAALMPT---------VLTFPLEMAVFMREHLNYWYSLKAYYLAKT------ 472

  Fly   646 SWVAGVSPFEILFSHVITQFVV-MCGQ---TTLVLIFMLVVFGVTNNGDLFWVIVLTLLQGMCGM 706
              :|.| ||:::...|....|. |.||   |:..|:|.                .|::...:...
  Rat   473 --MADV-PFQVVCPVVYCSIVYWMTGQPAETSRFLLFS----------------ALSIATALVAQ 518

  Fly   707 CFGFLISSVCELERNAIQLALGSF------YPTLLLSGVIWPIEGMPVVLRYISLCLPLTLATSS 765
            ..|.||.:.      :..|.:.:|      .|.||.||.....:.:|..|::.|
  Rat   519 SLGLLIGAA------STSLQVATFVGPVTAIPVLLFSGFFVSFKTIPTYLQWSS----------- 566

  Fly   766 LRSILTRGWAILESDVYIGYVSTLSWIVGFLVLTLLVLRAKRG 808
                            |:.||.     .||..|.|.:...:||
  Rat   567 ----------------YLSYVR-----YGFEGLILTIYGMERG 588

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snu	NP_651628.1	LolD	73..290	CDD:224059	58/229 (25%)
		ABC_DR_subfamily_A	74..286	CDD:213197	57/224 (25%)
		pip_yhgE_Nterm	427..>474	CDD:276270	8/46 (17%)
		ABC2_membrane_3	429..801	CDD:289468	62/389 (16%)
		ABC2_membrane	601..769	CDD:279410	33/185 (18%)
Abcg4	NP_001100286.2	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000