Sequence 1: | NP_651628.1 | Gene: | snu / 43391 | FlyBaseID: | FBgn0039594 | Length: | 808 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038957107.1 | Gene: | Abca16 / 293444 | RGDID: | 1563534 | Length: | 1680 | Species: | Rattus norvegicus |
Alignment Length: | 861 | Identity: | 182/861 - (21%) |
---|---|---|---|
Similarity: | 328/861 - (38%) | Gaps: | 206/861 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 67 PRNTQAAVSVRHAFKAYGKKKNANQVLNNLNMTVPKGTIYGLLGASGCGKTTLLSCIVGRRYMDA 131
Fly 132 GEIFVLGGKPGTRGSGVPGKRVGYMPQEIALYGEFSIQETMMYFGWIFGMDTKEILERLQFLLNF 196
Fly 197 LDLPSE-KRLVKNLSGGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVHITKAGQK 260
Fly 261 TVIITTHYIEEAR-QAHTIGLMRSGHLLAEESPSVLLSIYKC---ISLE-EVFLKLSRI-----Q 315
Fly 316 SQKGDVTHVNFSNNISL-----HAMAFGSKMDKPSSSQEG-GVV--GLNFHQSKEVLINDS---- 368
Fly 369 -NGSIYTLNQEPYSPPPSRRNNNPNDEESCQDCYSN--------LCKITS----------KGKIR 414
Fly 415 ALLTKNMLRMWRNVGVML--FIFALPVMQVILFCLAI-------------------------GRD 452
Fly 453 PQGLN---------------LAIVNGEMNDTVRENCYWEDGCHFKNLGCRYLSHLNTSVVKTYYE 502
Fly 503 DLDDAKEAVRKGTAWGAVYISENFTDAFIARANLGRDSDDETIDSSEVKVWLDMSNQQIGVMLNR 567
Fly 568 DIQLAFRDFAMGLLGQCGSNPKLGDVPIQFRDPIYGTMNPSFTDFVAPGVILTIVFFLAVALTSS 632
Fly 633 AL--IIERTEGLLDRSWVAGVSP----FEILFSHVITQFVVMCGQTTLVLIFMLVVFGVTNNGDL 691
Fly 692 FWVIVLTLLQGMCGMCFGFLISSVCELERNA-IQLALGSFYPTLLLSGVIWPI-----EGMP--- 747
Fly 748 -VVLRYISLCLP---LTLATS--------------SLRSI-LTRGWAILESDVY------IG-YV 786
Fly 787 STLSWIVGFLVLTLLV 802 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
snu | NP_651628.1 | LolD | 73..290 | CDD:224059 | 66/218 (30%) |
ABC_DR_subfamily_A | 74..286 | CDD:213197 | 65/213 (31%) | ||
pip_yhgE_Nterm | 427..>474 | CDD:276270 | 16/88 (18%) | ||
ABC2_membrane_3 | 429..801 | CDD:289468 | 78/454 (17%) | ||
ABC2_membrane | 601..769 | CDD:279410 | 37/200 (19%) | ||
Abca16 | XP_038957107.1 | rim_protein | <163..1664 | CDD:130324 | 182/861 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |