Sequence 1: | NP_651628.1 | Gene: | snu / 43391 | FlyBaseID: | FBgn0039594 | Length: | 808 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_775429.1 | Gene: | Abca5 / 286970 | RGDID: | 628661 | Length: | 1642 | Species: | Rattus norvegicus |
Alignment Length: | 879 | Identity: | 172/879 - (19%) |
---|---|---|---|
Similarity: | 328/879 - (37%) | Gaps: | 235/879 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 47 NNDGGTQPNAVAAWGAPANGPRNTQAAVSVRHAFKAYGKKKNANQVLNNLNMTVPKGTIYGLLGA 111
Fly 112 SGCGKTTLLS-----C--------IVGRRYMDAGEIFVLGGKPGTRGSGVPGKRVGYMPQEIALY 163
Fly 164 GEFSIQETMMYFGWIFGMDTKEILERLQFLLNFLDLPSEK-RLVKNLSGGQQRRVSFAVALMHDP 227
Fly 228 ELLILDEPTVGVDPLLRQSIWNHLVHITKAGQKTVIITTHYIEEARQAHTIGLMRSGHLLAEESP 292
Fly 293 SVLLSIYKCISLEEVFLK---------------------LSRIQSQKGDVTHVNFSNNISL-HAM 335
Fly 336 AFGSKMDKPSSSQEGGVVGLNFHQSKEVLINDSNG-SIYTL-------------NQEPYSPPPSR 386
Fly 387 RNNNPNDEESCQDCYSNLC------------------KITSKGKIRALLTKNMLRMWRNVGVMLF 433
Fly 434 IF-----------------ALPVMQV-ILFCLAIGRDPQGLNLAIV-----NGEMNDTV----RE 471
Fly 472 N---CYWEDGCHFKNLGCRYLSHL-NTSVVKTYYEDLDDAKEAVRKGTAWGAVYISEN-FTDAFI 531
Fly 532 ARANLGRDSDDETIDSSEVKVWLDMSNQQIGVMLNRDIQLAFRDFAMGLLGQCGSNPKLGDVPIQ 596
Fly 597 FRDPIYGTMN------PSFTD-----------FVAPGVILTIVFFLAVALTSSALIIERTEGLLD 644
Fly 645 RSWVAGVSPFEILFSHVITQFVVMCGQTTLVLIFMLVVFGVTNNGDLFWVIVLTLLQGMC----- 704
Fly 705 -GMCFGFLISSVCELERNAIQLALGSFYPTLLLSGVIWPIEGMPVVLRYISLCLPLTLATSSLRS 768
Fly 769 I-----LTRGWAILESDVYIGYVSTLSWIVGFLV 797 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
snu | NP_651628.1 | LolD | 73..290 | CDD:224059 | 71/230 (31%) |
ABC_DR_subfamily_A | 74..286 | CDD:213197 | 68/225 (30%) | ||
pip_yhgE_Nterm | 427..>474 | CDD:276270 | 13/76 (17%) | ||
ABC2_membrane_3 | 429..801 | CDD:289468 | 63/429 (15%) | ||
ABC2_membrane | 601..769 | CDD:279410 | 26/190 (14%) | ||
Abca5 | NP_775429.1 | ABC2_membrane_3 | <214..416 | CDD:289468 | |
CcmA | 476..788 | CDD:224054 | 94/346 (27%) | ||
ABC_subfamily_A | 478..701 | CDD:213230 | 73/249 (29%) | ||
ABC2_membrane_3 | <957..1224 | CDD:289468 | 46/327 (14%) | ||
CcmA | 1288..1615 | CDD:224054 | |||
ABC_subfamily_A | 1290..1521 | CDD:213230 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |