DRSC/TRiP Functional Genomics Resources

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Protein Alignment snu and SPOM_SPAC323.04

DIOPT Version :10

Sequence 1:NP_651628.1 Gene:snu / 43391 FlyBaseID:FBgn0039594 Length:808 Species:Drosophila melanogaster
Sequence 2:NP_594374.1 Gene:SPOM_SPAC323.04 / 2543203 PomBaseID:SPAC323.04 Length:487 Species:Schizosaccharomyces pombe


Alignment Length:224 Identity:66/224 - (29%)
Similarity:106/224 - (47%) Gaps:32/224 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VSVRHAFKAYGKKKNANQVLNNLNMTVPKGTIYGLLGASGCGKTTLLSCIVGRRYMDAGEIFVLG 138
            :|:.|....|..:|    ||:::|.|:.:|..:.|.|::|.||||||:.:||    |..::|...
pombe   265 ISMEHLNCVYWGRK----VLSDINWTIREGERWALTGSNGSGKTTLLAYVVG----DHPKLFASN 321

  Fly   139 ----GKPGTRGSGVP----GKRVGYMPQEIALYGEFSIQET---MMYFGW--IFGMD--TKEILE 188
                ||....|:|:.    .:.:|:...||  :..|..|.|   .:...|  .|.:.  |:..|.
pombe   322 IKFFGKSIGPGTGISIFDIQENIGHCSPEI--HNHFPKQHTCFEALLSAWSTTFTIPKLTETRLA 384

  Fly   189 RLQFLLNFLDLPSEK-RLVKNLSGGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLV 252
            .:..:|...:|...| :.:.::|.|.||.:.|..|::..|.|::||||..|||........|:|.
pombe   385 AISSILEEFELKDIKDKPLSSISVGMQRFILFCRAIVKQPRLVVLDEPFQGVDTKYVHMAHNYLN 449

  Fly   253 HITKAGQKTVIITTHYIEEA-----RQAH 276
            ......|..||| :||.:|.     |:||
pombe   450 EKLSPSQAMVII-SHYEDELPACVNRRAH 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
snuNP_651628.1 CcmA 74..311 CDD:440746 66/224 (29%)
YadH 609..807 CDD:440604
SPOM_SPAC323.04NP_594374.1 PRK10938 24..475 CDD:182852 63/220 (29%)
Blue background indicates that the domain is not in the aligned region.

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