Protein Alignment snu and Abca16

DIOPT Version :9

• Sequence 1: NP_651628.1
• Gene: snu / 43391
• FlyBaseID: FBgn0039594
• Length: 808
• Species: Drosophila melanogaster
• Sequence 2: XP_006507746.1
• Gene: Abca16 / 233810
• MGIID: 2388711
• Length: 1679
• Species: Mus musculus
• Alignment Length: 844
• Identity: 181/844 - (21%)
• Similarity: 336/844 - (39%)
• Gaps: 172/844 - (20%)

  Fly    67 PRNTQAAVSVRHAFKAYGKKKNANQVLNNLNMTVPKGTIYGLLGASGCGKTTLLSCIVGRRYMDA 131
            |.|.:|.:.:.|..|.: |.|.|   :|||::.:.:|.:..|||.:|.||||.||.:.||.....
Mouse   509 PPNLEAGIHIMHLHKEF-KNKPA---VNNLSLNIYEGQVTVLLGHNGAGKTTTLSVLTGRFAATR 569

  Fly   132 GEIFVLGGKPGTRGSGVPGKRVGYMPQEIALYGEFSIQETMMYFGWIFGMDTKEILERLQFLLNF 196
            ||.::.|.........| .|.:|:.||...|:.:.::.|.:.::..:.|:......|.:..:|:.
Mouse   570 GEAYINGYNISDNMIEV-RKDLGFCPQHDLLFDDLTLSEHLFFYCMVKGIPQNINCEEIDRMLSA 633

  Fly   197 LDLPSE-KRLVKNLSGGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVHITKAGQK 260
            .:|... ..|..:.|||.:|::|..:|||...:::|||||:.|:||:.|::.|:.|.|...  .:
Mouse   634 FNLQENYHTLSGSASGGVRRKLSIVLALMAGSKVVILDEPSSGMDPVSRRATWDILQHYKH--NR 696

  Fly   261 TVIITTHYIEEAR-QAHTIGLMRSGHLLAEESPSVLLSI----YKCISLEEVFLKLSRI-----Q 315
            |:::||||::||. ....:.:|..|.|....|...|..|    |..:..::.:..:..|     |
Mouse   697 TILLTTHYMDEADVLGDRVAIMVRGTLHCCGSSVFLKQIYGAGYHIVMEKQQYCDVDNIIAMIQQ 761

  Fly   316 SQKGDVTHVNFSNNISL-----HAMAFGSKMDKPSSSQEG-GVV--GLNFHQSKEVLIN-----D 367
            ...|.|...|..|.:|.     :...|.:...:....|:. |:.  |.:....:||.:.     .
Mouse   762 HVPGAVLENNIENELSFILPKKYVSRFETLFTELEMRQKALGIASFGASITTMEEVFVKVNKLAT 826

  Fly   368 SNGSIYTLNQEPYSPPPSRRNNNPNDEESCQDCYSN-----LCKITS----------KGKIRALL 417
            ...||.|:  :||.....:...:.....:....||.     |.:|.:          :.:..:|.
Mouse   827 PQKSIQTI--QPYYLAYRKMRQDEQQNVNMPINYSKPNFPYLSEIATVKFNTGVPLYRQQFYSLF 889

  Fly   418 TKNMLRMWRNVGVML--FIFALPVMQVILFCLAIGRDPQGLNLAIVNGEMNDTVRENCYWEDGCH 480
            .|..|.:.||...||  .|..:.|...:|..|.:.      |..|...|:|
Mouse   890 IKRALFISRNWKFMLLQIIVVMVVTTYLLLALHLN------NNDIPERELN-------------- 934

  Fly   481 FKNLGCRYLSHLNTSVVKTYYEDLDDAKEAVRKGTAWGAVYISENFTDAFIARAN-----LGRDS 540
                    |||...::|.  |.         ..|.:..|:.:::|. :.|:...|     :..|.
Mouse   935 --------LSHYGRTIVP--YS---------TSGNSDLALNLTKNL-NIFLKSKNQNLRKIRGDM 979

  Fly   541 DDETIDSSE--------VKVWLDMSNQQIGVMLNRD------IQLAFRDFAMGLLGQCGSNPKLG 591
            :|..:.:.:        :.:.::.:...:.:..|.:      |.|:..|   .:|....|.|...
Mouse   980 NDYILKNKDCHTFCLVALSIKVERNKTVLTIFFNNEAYHSPAISLSILD---NILFMTLSGPDAS 1041

  Fly   592 DVPIQFRDPIYGTMNPSFTDFVAP----GVILTIVFFLAVALTSSAL--IIERTEGLLDRSWVAG 650
            ........|:     |.:...:.|    .::..:.|.::|.:.|.::  :.|||.......::.|
Mouse  1042 ITVFNKPQPL-----PHYGSNIVPVNGLQIVQCLAFGISVVVGSFSIQTVTERTSQAKHIQFLTG 1101

  Fly   651 VSP----FEILFSHVITQFVVMCGQTTLVLIF---MLVVFGVTNNGDLFWVIVLTLLQGMCGMCF 708
            |..    ...|...:|..|...|   .|:.||   .|..|.|..|  ....|::.:|.|.|.:..
Mouse  1102 VCVHTYWLSALLCDLIFFFFACC---VLLAIFKFCQLEAFVVHYN--FLDTILIFMLYGWCVVPL 1161

  Fly   709 GFLISSVCELERNA-IQLALGSFYPTLLLSGVIWPI-----EGMP----VVLRYISLCLP---LT 760
            .::.|.:......| |::.|.:::.| :.|.:|:.|     ...|    :::|.|.:.||   |.
Mouse  1162 TYIASFLFNSSTAAYIKITLFNYFST-MFSIIIYTIIQFYGNDFPNFVHILIRAILMALPSYNLA 1225

  Fly   761 LATS------SLRSILTRGWAIL---------ESDVY------IG-YVSTLSWIVGFLVLTLLV 802
            ::.|      .::.:..|.:..:         :::||      || ::.||: .:|.:.|.||:
Mouse  1226 MSISKYFDDYEVKRLCAREFKSIYLDCSDPYTQNNVYGFGEHGIGKFLITLA-TIGLVFLLLLL 1288

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snu	NP_651628.1	LolD	73..290	CDD:224059	66/218 (30%)
		ABC_DR_subfamily_A	74..286	CDD:213197	65/213 (31%)
		pip_yhgE_Nterm	427..>474	CDD:276270	11/48 (23%)
		ABC2_membrane_3	429..801	CDD:289468	79/440 (18%)
		ABC2_membrane	601..769	CDD:279410	40/199 (20%)
Abca16	XP_006507746.1	rim_protein	<196..1665	CDD:130324	181/844 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0059
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810