Protein Alignment snu and Abca2

DIOPT Version :10

• Sequence 1: NP_651628.1
• Gene: snu / 43391
• FlyBaseID: FBgn0039594
• Length: 808
• Species: Drosophila melanogaster
• Sequence 2: XP_006497672.1
• Gene: Abca2 / 11305
• MGIID: 99606
• Length: 2464
• Species: Mus musculus
• Alignment Length: 335
• Identity: 86/335 - (25%)
• Similarity: 148/335 - (44%)
• Gaps: 59/335 - (17%)

  Fly    67 PRNTQAAVSVRHAFKAYGKKKNANQVLNNLNMTVPKGTIYGLLGASGCGKTTLLSCIVGRRYMDA 131
            |.:....|.|....|.|  |.:....||.|::.:.:..:...||.:|.||||.:|.:.|.....:
Mouse  1013 PTHLPLVVCVDKLTKVY--KNDKKMALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTS 1075

  Fly   132 GEIFVLGGKPGTRGSGVPGKRVGYMPQEIALYGEFSIQETMMYFGWIFGMDTKEILERLQFLLNF 196
            |...:.|....|....: .|.:|..||...|:...:::|.:.::..:..|..:||.:....::..
Mouse  1076 GSATIYGHDIRTEMDEI-RKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRKETDKMIED 1139

  Fly   197 LDLPSEKR--LVKNLSGGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVHITKAGQ 259
            |:| |.||  ||:.||||.:|::|.|:|.:.....:||||||.||||..|::||: |:...|.|
Mouse  1140 LEL-SNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWD-LILKYKPG- 1201

  Fly   260 KTVIITTHYIEEA-RQAHTIGLMRSGHLLAEESPSVLLSIYKCISLEEVFLKLSRIQSQKGDVTH 323
            :|::::||:::|| .....|.::..|.|....||..|...|                   ||.
Mouse  1202 RTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGAY-------------------GDG-- 1245

  Fly   324 VNFSNNISLHAMAFGSKMDKPSSSQEGGVVG-------------------LNFHQSKEVLINDSN 369
                     :.:....:..:|.:|||.|:..                   :..|.:..:|::|::
Mouse  1246 ---------YRLTLVKQPAEPGTSQEPGLASSPSGCPRLSSCSEPQVSQFIRKHVASSLLVSDTS 1301

  Fly   370 GSI-YTLNQE 378
            ..: |.|..|
Mouse  1302 TELSYILPSE 1311

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snu	NP_651628.1	CcmA	74..311	CDD:440746	72/239 (30%)
		YadH	609..807	CDD:440604
Abca2	XP_006497672.1	rim_protein	58..2398	CDD:130324	86/335 (26%)