Protein Alignment snu and abca5

DIOPT Version :10

• Sequence 1: NP_651628.1
• Gene: snu / 43391
• FlyBaseID: FBgn0039594
• Length: 808
• Species: Drosophila melanogaster
• Sequence 2: NP_001092716.2
• Gene: abca5 / 100151075
• ZFINID: ZDB-GENE-050517-5
• Length: 1673
• Species: Danio rerio
• Alignment Length: 824
• Identity: 181/824 - (21%)
• Similarity: 299/824 - (36%)
• Gaps: 259/824 - (31%)

  Fly    81 KAYGKKKNANQVLNNLNMTVPKGTIYGLLGASGCGKTTLLSCIVGRRYMDAGEIFVLGGKPGTRG 145
            |.|.:|....:.|..|...:.:|.|..|||.||.||:||::.:.|......|...:.|.......
Zfish   507 KIYREKDTKVEALRGLTFDIYEGQITALLGHSGAGKSTLMNILCGICPPTEGTATIYGSPVAEIA 571

  Fly   146 SGVPGKR-VGYMPQEIALYGEFSIQETMMYFGWIFGMDTKEILERLQFLLNFLDLPSEK---RLV 206
            .|...|: ||..||...::...:::|.:..|..|.|:...:|...::.:|..|||  ||   .|.
Zfish   572 EGAEMKQLVGICPQFNIIFDVLTVEEHLRIFAAIKGILPSDIDGEVRKVLKDLDL--EKIMDALA 634

  Fly   207 KNLSGGQQRRVSFAVALMHDPELLILDEPTVGVDPLLRQSIWNHLVHITKAGQKTVIITTHYIEE 271
            |||||||:|::|..:|::.||::|:|||||.|:||:.|..:|: |:...:||:.|| ::|||::|
Zfish   635 KNLSGGQKRKLSVGIAILGDPKILLLDEPTAGMDPVSRHQVWS-LLKSRRAGRVTV-LSTHYMDE 697

  Fly   272 A----------------------------------RQAHTIGLMRSG--HLLAEESPSVLLSIYK 300
            |                                  |.:.|.|....|  .|:.:..|...||..:
Zfish   698 ADILADRKAVISQGQLKCVGSSLYLKTKCGVGYHLRMSVTEGCEVEGITSLVKQHVPKAQLSRQQ 762

  Fly   301 ------------------------C-------------ISLEEVFLKLSRIQSQKGDVTHVNFS- 327
                                    |             .:||:|||:|    ..:.:|...::|
Zfish   763 EAELTFTLPFESMDTFPGLFAELDCRPDLGIINYGVSMTTLEDVFLRL----EAEAEVDQADYSV 823

  Fly   328 -NNISLHAMAFGSKMDKP-------SSSQEGGVVG----------------LNFHQSKEVLINDS 368
             |...:......|.||..       |.|::..|.|                ||..:.::.:|.:.
Zfish   824 FNQEKVEEEGDASSMDDTDQRLLTFSDSRQDTVTGHALWRQQFSTVAWLHMLNLQRERKPIIYNL 888

  Fly   369 N-----------GSIYTLNQEPYSPPP-------SRRNNNPNDEESCQDCYSNLCKITSKGKIRA 415
            .           .|:.|.|.:.:||..       .|||..|: :.:......|.......|.|..
Zfish   889 TLFVVFLSAMLILSVATGNIQIHSPERLFSPIYLLRRNEAPH-KYTTSLLVQNSTDSDLSGFIHN 952

  Fly   416 LLTKNM-LRMWRNVGVMLFIFALPVMQVILFCLAIGRDPQGLNLAIVNGEMNDTVRENCYWEDGC 479
            |.:::: :.|.:.:.   ::.|.||...|                .|.|...|......:.....
Zfish   953 LQSQDIKVEMMKKLD---YMSAAPVSAAI----------------NVTGPSKDFTYILAFNSTTV 998

  Fly   480 HFKNLGCRYLSHL------NTSVVKTYYEDLDDAKEAVRKGTAWGAVYISENFTDAFIARANLGR 538
            |...:....||:.      .|..::|:.:..|   ..:...|::..|||     :|.|    ||
Zfish   999 HSLPMAVNVLSNALLRGYNGTGHIRTWSKPFD---YQIPDKTSYALVYI-----EAVI----LG- 1050

  Fly   539 DSDDETIDSSEVKVWLDMSNQQIGVMLNRDIQLAFRDF--AMGLLGQ---CGSNPKLGDVPIQFR 598
                  :.::.:..:..|.:       .||.:|..|..  ..||:..   ||.  ...|||..:.
Zfish  1051 ------MLAAGMPAYFAMDH-------TRDRELKCRSTLRISGLVPSAYWCGQ--AAIDVPFYYL 1100

  Fly   599 DPIYGTMNPSFTDFVAPGVILTIVFFLAVALTSSALIIERTEGLLDRSWVAGVSPFEILFSHVIT 663
              |...|..:...|.:.. :||....|:|||.                 :.|.||..:||::.::
Zfish  1101 --ILTCMTSTLFAFHSTN-LLTSHNILSVALC-----------------LIGFSPAMVLFTYCVS 1145

  Fly   664 QFVVMCGQTTLVLIFMLVVFGVTNNGDLFWVIVLTLLQGMCGMCFGFLISSVCELERNAIQLALG 728
                          ||.|  .|.:|.|.|.|:.:                .||.:..:.:||||.
Zfish  1146 --------------FMFV--RVQSNRDFFSVVSM----------------MVCVVSASIVQLALV 1178

  Fly   729 S--------FYPTLLLSGVIWPIEGMPVVLRYISLCLP-LTLAT 763
            :        .:..|.....::|:.|          ||. :|:||
Zfish  1179 NESASMARLLHNALCFFSPLYPLMG----------CLNCITVAT 1212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
snu	NP_651628.1	CcmA	74..311	CDD:440746	84/306 (27%)
		YadH	609..807	CDD:440604	34/164 (21%)
abca5	NP_001092716.2	rim_protein	<188..1634	CDD:130324	181/824 (22%)