DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sid and NUC1

DIOPT Version :10

Sequence 1:NP_651627.1 Gene:Sid / 43390 FlyBaseID:FBgn0039593 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_012327.1 Gene:NUC1 / 853222 SGDID:S000003744 Length:329 Species:Saccharomyces cerevisiae


Alignment Length:131 Identity:32/131 - (24%)
Similarity:46/131 - (35%) Gaps:50/131 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 FDRGHMTPAS-AFISTELKKSTFRYLNAIPQY-RGVNRGKWKAVETWVNNMVRGLYDNPIINNVQ 254
            :||||..||: |..|.:....||...|..||. .|.||..|..:|.:    .|||          
Yeast   134 YDRGHQAPAADAKFSQQAMDDTFYLSNMCPQVGEGFNRDYWAHLEYF----CRGL---------- 184

  Fly   255 IPRTYDVLKVCIGALGVHRLRHNTNNNMIPIYL-----LDNN------------KIPVPEWMYKI 302
             .:.|..:::..|                |:||     :||.            .|.||...:|:
Yeast   185 -TKKYKSVRIVTG----------------PLYLPKKDPIDNKFRVNYEVIGNPPSIAVPTHFFKL 232

  Fly   303 V 303
            :
Yeast   233 I 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SidNP_651627.1 Endonuclease_NS 106..358 CDD:460120 32/131 (24%)
NUC1NP_012327.1 NUC 74..290 CDD:214683 32/131 (24%)

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