Protein Alignment Sid and EndoG

DIOPT Version :10

• Sequence 1: NP_651627.1
• Gene: Sid / 43390
• FlyBaseID: FBgn0039593
• Length: 370
• Species: Drosophila melanogaster
• Sequence 2: NP_610737.1
• Gene: EndoG / 36309
• FlyBaseID: FBgn0033690
• Length: 310
• Species: Drosophila melanogaster
• Alignment Length: 282
• Identity: 65/282 - (23%)
• Similarity: 101/282 - (35%)
• Gaps: 60/282 - (21%)

  Fly    64 NG---GLHRTTFLCRYDSVFSPALSSAACAPPDPVVVKVPDTSCSIPSATFAVGFSFNGRFMELY 125
            ||   ||.|...|..:.:|     |:|:..|.....|.:..|    ||           |..::.
  Fly    33 NGSTSGLPRLPGLPTFGTV-----SAASLIPAQENNVSLTAT----PS-----------RIGQIM 77

  Fly   126 RNCFDGYSLAFQHSIY-KAYRYVNTVPRPNPTWQSDQLSGGFDNAYEGRATQACLLTNLGAVQP- 188
            :..|.|......||.| .:|...|.||.    |..:.|:.......:......|......::.|
  Fly    78 KYGFPGLDHVRSHSDYVLSYDRRNRVPH----WVFEHLTAESVAKNDAVDRSKCDFKQDESIHPF 138

  Fly   189 ---------QCKFDRGHMTPASAF-ISTELKKSTFRYLNAIPQY-RGVNRGKWKAVETWVNNMVR 242
                     :..:|||||..|... :..:....||...|..||. :|.||..|..:|..|.
  Fly   139 FRSQNTDYRRSGYDRGHMAAAGNHRLHQKHCDETFYLSNMAPQVGQGFNRDAWNTLEAHVR---- 199

  Fly   243 GLYDNPIINNVQIPRTYDVLKVCIGALGVHRLRHNTNNNMIPIYLLDNNKIPVPEWMYKIVSHLS 307
                       ::.:||..:.||.|.|.:.. :.:...:.:...::..|.:.||...||::...|
  Fly   200 -----------RLTKTYSNVYVCTGPLYLPH-KEDDGKSYVKYEVIGANTVAVPTHFYKVIVGES 252

  Fly   308 GD-KWVMLTYNDVSLPNQQALN 328
            .| |..|.:|   .:|||...|
  Fly   253 ADHKLHMESY---VMPNQVISN 271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Sid	NP_651627.1	Endonuclease_NS	106..358	CDD:460120	53/237 (22%)
EndoG	NP_610737.1	NUC	77..309	CDD:238043	50/218 (23%)