DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sid and LOC105945145

DIOPT Version :9

Sequence 1:NP_651627.1 Gene:Sid / 43390 FlyBaseID:FBgn0039593 Length:370 Species:Drosophila melanogaster
Sequence 2:XP_017948005.1 Gene:LOC105945145 / 105945145 -ID:- Length:332 Species:Xenopus tropicalis


Alignment Length:292 Identity:59/292 - (20%)
Similarity:95/292 - (32%) Gaps:89/292 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 LCNGGLHRTTFLCRYDSVFSPALSSAACAPPDPVVVKVPDTSCSIPSATFAVGFSFNGRFMELYR 126
            :|....:|..|...||......|.||.      ::.:.|.:.......||     ||.....:||
 Frog    71 ICQKYGNRVYFASLYDRGRRVPLYSAY------ILDRRPTSKPINKRQTF-----FNIEPQLIYR 124

  Fly   127 NCFDGYSLAFQHSIYKAYRYVNTVPRPNPTWQSDQLSGGFDNAYEGRATQACLLTNLGAVQPQCK 191
            . .||..|. :.:.....:..||....:|..|.:|.|.              |:....||....:
 Frog   125 Q-LDGTMLP-ERNTSNNIKTFNTKHNISPREQKNQPSS--------------LINTSQAVDADYR 173

  Fly   192 ---FDRGHMTPASAFISTELKKSTFRYLNAIPQYRGVNRGKWKAVETWVNNMVRGLYDNPIINNV 253
               :||||:.|....::.:.:|.||...|.:|..:.:|...|..            |:|.:|.:.
 Frog   174 NSGYDRGHVNPRGHHVTDDEQKGTFTLTNVVPMAKKLNNEFWSQ------------YENDMIGSA 226

  Fly   254 QIPRTYDVLKVCIGALGVHRLRHNTNNNMIPIYLLDNNKIPVPEWMYKIVSHLSGDKWVMLTYND 318
            :..:|..|:      .|:                     :|..||       :.||:        
 Frog   227 KGCKTMYVV------TGI---------------------VPSKEW-------IKGDR-------- 249

  Fly   319 VSLPNQQALNQICHV----IPCHPGLNLNTKD 346
            |::| :...|..|.|    .|...|..|...|
 Frog   250 VNIP-KYMWNAYCCVGKDDKPIKSGAGLRKND 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SidNP_651627.1 Endonuclease_NS 106..358 CDD:279553 50/248 (20%)
LOC105945145XP_017948005.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D556753at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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