DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sid and si:dkey-243k1.3

DIOPT Version :10

Sequence 1:NP_651627.1 Gene:Sid / 43390 FlyBaseID:FBgn0039593 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001373225.1 Gene:si:dkey-243k1.3 / 100537487 ZFINID:ZDB-GENE-131121-191 Length:283 Species:Danio rerio


Alignment Length:226 Identity:48/226 - (21%)
Similarity:88/226 - (38%) Gaps:65/226 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 KVPDTSCSIPSATFAVGFSFNGRFMELYR--NCFDGYSLAFQHSIYKAY------------RYVN 148
            |:||.....|:..     ....||:..|.  ..:|.|   .:.::|.||            |:..
Zfish    40 KIPDLGAFQPNLV-----RICQRFLNTYHFATLYDTY---HRIAVYSAYIFEPSSGGGREKRWFV 96

  Fly   149 TVPRPNPTWQSD-----QLSGGFDNAYEGRATQACL--LTNLGAVQPQCKFDRGHMTPASAFIST 206
            .....:|.|.::     :||....:.|.|. .||..  .||.|       |||||:.| :...:.
Zfish    97 EPQLVSPAWSTEMEDGYKLSQQNPDIYLGE-KQALNEDYTNSG-------FDRGHLNP-NGHHAV 152

  Fly   207 ELKKSTFRYLNAIPQYRGVNRGKWKAVETWVNNMVRGLYDNPIINNVQIPRTYDVLKVCIGALGV 271
            ..:.:||...|.:||...:|:..|...|:.:.::.:          ....:.|    |.:||:  
Zfish   153 PSRNATFTLTNVVPQNPTLNQNAWNKHESKLTSLFK----------ANCHQAY----VLVGAI-- 201

  Fly   272 HRLRHNTNNNMIPIYLLDNN--KIPVPEWMY 300
                 .::||    :::.||  ::.:||:::
Zfish   202 -----PSSNN----WIIKNNVKRVNIPEYLW 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SidNP_651627.1 Endonuclease_NS 106..358 CDD:460120 45/218 (21%)
si:dkey-243k1.3NP_001373225.1 Endonuclease_NS 62..263 CDD:214889 42/199 (21%)

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