DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sid and LOC100002544

DIOPT Version :10

Sequence 1:NP_651627.1 Gene:Sid / 43390 FlyBaseID:FBgn0039593 Length:370 Species:Drosophila melanogaster
Sequence 2:XP_001920405.5 Gene:LOC100002544 / 100002544 -ID:- Length:336 Species:Danio rerio


Alignment Length:285 Identity:60/285 - (21%)
Similarity:96/285 - (33%) Gaps:91/285 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 PP----DPVVVKVPDTSCSIPSATFAVGFSFNGRFMELYRNCFDGYSLAFQHSIYKAYRYVNTV- 150
            ||    ||.:.|:.......|            ||:.|       |....:..:|.||.:..|. 
Zfish    76 PPRGFKDPSLKKICQRYADKP------------RFVTL-------YDPKIRIPVYSAYSFKKTEG 121

  Fly   151 -PRPNPTW----QSDQLSGG-----FDNAY---EGRATQACLLTNLGAVQPQCKFDRGHMTPASA 202
             .|.:..|    |..::.|.     |...|   :...:||.|......|    .::|||:.|...
Zfish   122 DRRVDYPWMYEPQLAEIDGNGNMMPFPTGYLHMKFEDSQAVLDDYSDVV----LYERGHLNPDQH 182

  Fly   203 FISTELKKSTFRYLNAIPQYRGVNRGKWKAVETWV----NNMVRGLYDNPIINNVQIPRTYDVLK 263
            ....:.:.:|:...|.:|:.|..|.|.|:..|..:    ||..||             ..|.|..
Zfish   183 QSDPQDRAATYTLTNVVPEIREFNIGPWRQYEERIRVRLNNFCRG-------------TAYIVTG 234

  Fly   264 VCIGALGVHRLRHNTNNNMIPIYLLDNNKIPVPEWMYKIVSHLSGDKW--VMLTYNDVSLPNQQA 326
            |      :|.......||:        |::.:||           |.|  ...|..|.:.|:.:.
Zfish   235 V------IHAGNMIRRNNL--------NRVGIPE-----------DVWSAYCCTDYDRNSPHVER 274

  Fly   327 LNQICHVIPCHPGLNLNTKDVGHTV 351
            ::     .|.:..:..|.|: |:||
Zfish   275 IH-----FPTYAAIAKNAKE-GNTV 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SidNP_651627.1 Endonuclease_NS 106..358 CDD:460120 55/266 (21%)
LOC100002544XP_001920405.5 None

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