DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14062 and CG3819

DIOPT Version :10

Sequence 1:NP_001034074.1 Gene:CG14062 / 43389 FlyBaseID:FBgn0039592 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_649078.1 Gene:CG3819 / 40069 FlyBaseID:FBgn0036833 Length:423 Species:Drosophila melanogaster


Alignment Length:317 Identity:79/317 - (24%)
Similarity:141/317 - (44%) Gaps:34/317 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 TASSAVGETLQMWCNPRDIVATTCQAGRVPAF-QPPLPMTCRAAPAAITTPVQDRRCPATMYRVG 110
            ||....|.|.::.....|:.|..|.:.  |.| ......:|...              .|:.:||
  Fly   107 TAKCVGGTTFKIDDKEHDLSAIKCTSW--PVFVGKKSGSSCNGG--------------TTLIKVG 155

  Fly   111 YNVGNNQFLELYRACFDTRAVRAIFVEHRVY-GKPFYITR-PCVQFSSDGVISGAD-EASYTVRN 172
            :.:..::|...|..||:.......:|.||:. |..:|.|. ..:.|.:.|..:|.: :..||...
  Fly   156 FELSGSRFATQYEVCFNEDEEVTRYVYHRLEPGNNYYATGVDRITFGAGGYFAGKNVDKLYTQAV 220

  Fly   173 IHGTF-RRLFGNNQNYIPNNRDVIINRGHLAASADFFFGDQLCATFKYVNAVPQFKSINDGNWET 236
            ...|. :.|..::..:..:.:::.:.|||:.|.|||.|..:..|||.::||.||:::.|.|||..
  Fly   221 QKETIDKELDMDSSRFFDSAKNIFLARGHMGAKADFVFAPEQRATFLFINAAPQWQTFNAGNWAR 285

  Fly   237 IERFVRNSVT-GNNFVNVRTGARGVLSLPSGN-RPKNVFLSGNRN-----PVPQWMYKIVRNANN 294
            :|..||..|. .|..|...||..||.:||:.| ..:.::||.:.|     |||:..:::|...:.
  Fly   286 VEDGVRAWVAKENKHVECWTGVWGVTTLPNKNGEQRQLYLSHDNNGNGLIPVPKLYFRVVIEPST 350

  Fly   295 QPIVAFLTLNNIYARQRPAAPNF--CQPVNCPVALVNTAQ----AGFSFCCNPATFR 345
            :..:..:.:||.:........::  |..|:..:..::..:    ||:|:.|....||
  Fly   351 KKGIVLIGVNNPHLSLEEIKRDYILCTDVSDRINWISWKKTDITAGYSYACEVPEFR 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14062NP_001034074.1 Endonuclease_NS 102..344 CDD:460120 67/258 (26%)
CG3819NP_649078.1 NUC 164..415 CDD:238043 65/244 (27%)

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