DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14062 and EndoG

DIOPT Version :10

Sequence 1:NP_001034074.1 Gene:CG14062 / 43389 FlyBaseID:FBgn0039592 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_610737.1 Gene:EndoG / 36309 FlyBaseID:FBgn0033690 Length:310 Species:Drosophila melanogaster


Alignment Length:266 Identity:63/266 - (23%)
Similarity:94/266 - (35%) Gaps:67/266 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 PPLPMTCRAAPAAITTPVQDRR--CPATMYRVGYNVGNNQFLEL-------------YRACFDTR 129
            |.|| |.....||...|.|:..  ..||..|:|      |.::.             |...:|.|
  Fly    43 PGLP-TFGTVSAASLIPAQENNVSLTATPSRIG------QIMKYGFPGLDHVRSHSDYVLSYDRR 100

  Fly   130 AVRAIFVEHRVY--------GKPFYITRPCVQFSSDGVISGADEASYTVRNIHGTFRRLFGNNQN 186
            .    .|.|.|:        .|...:.|....|..|             .:||..||   ..|.:
  Fly   101 N----RVPHWVFEHLTAESVAKNDAVDRSKCDFKQD-------------ESIHPFFR---SQNTD 145

  Fly   187 YIPNNRDVIINRGHLAASADFFFGDQLC-ATFKYVNAVPQF-KSINDGNWETIERFVRNSVTGNN 249
            |..:..|    |||:||:.:.....:.| .||...|..||. :..|...|.|:|..||......:
  Fly   146 YRRSGYD----RGHMAAAGNHRLHQKHCDETFYLSNMAPQVGQGFNRDAWNTLEAHVRRLTKTYS 206

  Fly   250 FVNVRTGARGVLSLP-----SGNRPKNVFLSGNRNPVPQWMYKIV--RNANNQ-PIVAFLTLNNI 306
            .|.|.||.   |.||     ..:..|...:..|...||...||::  .:|::: .:.:::..|.:
  Fly   207 NVYVCTGP---LYLPHKEDDGKSYVKYEVIGANTVAVPTHFYKVIVGESADHKLHMESYVMPNQV 268

  Fly   307 YARQRP 312
            .:...|
  Fly   269 ISNDTP 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14062NP_001034074.1 Endonuclease_NS 102..344 CDD:460120 55/242 (23%)
EndoGNP_610737.1 NUC 77..309 CDD:238043 50/225 (22%)

Return to query results.
Submit another query.