DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14062 and cps-6

DIOPT Version :10

Sequence 1:NP_001034074.1 Gene:CG14062 / 43389 FlyBaseID:FBgn0039592 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_491371.1 Gene:cps-6 / 172045 WormBaseID:WBGene00000787 Length:308 Species:Caenorhabditis elegans


Alignment Length:237 Identity:55/237 - (23%)
Similarity:85/237 - (35%) Gaps:51/237 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 AGRVP--AFQPPLPMTCRAAPAAITTPVQDRRCPATMYRVGY-NVGNNQFLELYRACFDTRAVRA 133
            |..||  ..|...|||.:  ||::..........|.:.:.|| ...|.:..|.:...:|.:...|
 Worm    35 ATNVPMNQIQVSEPMTVK--PASLNADAMGPSRSAEIMKHGYPGFTNVRTYEDFVLSYDYKTRTA 97

  Fly   134 IFV-EHRVYGKPFY---ITRPCVQFSSDGVISGADEASYTVRNIHGTF-RRLFGNNQNYIPNNRD 193
            .:| ||....:..:   :.|...:|..|                 .|| ::....|.:|..:..|
 Worm    98 HWVCEHLTPERLKHAEGVDRKLCEFKPD-----------------ITFPQKFLSQNTDYKCSGFD 145

  Fly   194 VIINRGHLAASADF----FFGDQLCATFKYVNAVPQF-KSINDGNWETIERFVRNSVTG--NNFV 251
                ||||||:.:.    ...||   ||...|..||. :..|...|..:|...|.....  |:::
 Worm   146 ----RGHLAAAGNHRKSQLAVDQ---TFYLSNMSPQVGRGFNRDKWNDLEMHCRRVAKKMINSYI 203

  Fly   252 NVRTGARGVLSLP--SGNRPKNV---FLSGNRNPVPQWMYKI 288
                 ..|.|.||  .|:..|.:   .:..|...||...:|:
 Worm   204 -----ITGPLYLPKLEGDGKKYIKYQVIGDNNVAVPTHFFKV 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14062NP_001034074.1 Endonuclease_NS 102..344 CDD:460120 46/205 (22%)
cps-6NP_491371.1 NUC 83..293 CDD:214683 42/187 (22%)

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