DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9988 and CG1428

DIOPT Version :9

Sequence 1:NP_651625.1 Gene:CG9988 / 43388 FlyBaseID:FBgn0039591 Length:668 Species:Drosophila melanogaster
Sequence 2:NP_610127.1 Gene:CG1428 / 35433 FlyBaseID:FBgn0032967 Length:617 Species:Drosophila melanogaster


Alignment Length:627 Identity:150/627 - (23%)
Similarity:253/627 - (40%) Gaps:135/627 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 VLFINESLASIILNSNGGEY--NCYYQEITRDRK-------------HDSYDKMERKYFSQNYEV 165
            |:|:|.|:..:     .|::  ..:|..|....|             .|..:.:|.|..|::   
  Fly    44 VVFVNTSVCHV-----SGQWKPTAFYSAIEPVNKLRCRMTQLLTAITQDGSNFLEAKRISED--- 100

  Fly   166 PLHVEGLILTCH-------------------------------RLGNESDILQ---SDAYNLIQY 196
                    |:|.                               ::|....|::   ||.:...:|
  Fly   101 --------LSCRYWLKSGHTRNHSGHYTAYGHFDLKRGATRKIKIGTGEQIVRIRCSDKFKASKY 157

  Fly   197 R--------PPPKGLSLKPSKRKPSVLMFGIDSLSRINLRRTMPKVYKFLTRDGWFEQQGYNKIG 253
            .        |.||.:|.: |..|.||::.||||:|.::..|..|.|..||......:..||:::|
  Fly   158 HDVLYFLSPPDPKLMSTE-SSEKLSVMVLGIDSVSHMHFVRYFPLVMAFLENHPHTKFFGYSRVG 221

  Fly   254 DNTFPNLLAILTGYNPESAIKKVCNWHEDGCLDRTPFIWHYFRNASYLTAYAEDEA-GINTFNYW 317
            .:...||:..|.|.:..:|...:.:       |...::|..|:...|.|||.||.| ||.:....
  Fly   222 LDANANLVPFLGGKSSRAAGSDILS-------DEKAWLWDSFKMEGYSTAYGEDNAKGILSNRNG 279

  Fly   318 KPGFLEQPTDFYLRPLQKAIESGLNTWKCSDC-SMKYC-IGRRITSSYAYDMARNFANR---FVD 377
            .....:.|.||.|.|:  .:|...:|....|. .|.:| .||:.     .|:.|:|..:   ::.
  Fly   280 DKELPKSPVDFDLTPV--IVEMNNHTRYSIDLKEMIHCTAGRKF-----QDVLRDFVLQLVPYMQ 337

  Fly   378 ERPIWGLFWSNSFSHDSFQMPSKME-DY--VLQYLLDFEADGVFDQSIMVFLSDHGSRYGRLMSL 439
            ..|.:..||.:....:.::....:: .|  :|:.|||  || :.:.:::..:||||.|.|.....
  Fly   338 GMPFFSFFWQSQGVQEYYEYAWHLDLSYMMLLKKLLD--AD-ILNNTLLFLMSDHGLRAGEYRMS 399

  Fly   440 PSGFLEERLPSMFIYLPPWFRAQYPEYARALELNRNRLTSNYDLHNTLKHIIELGGTPDG----- 499
            ..|..||..|.|....|.|.:.:||.....||.|.:.|.:.|||..||..:|.||...|.     
  Fly   400 LQGMKEESQPLMVAIYPEWLKRKYPLAVGNLESNAHSLITPYDLRETLADVIALGQLKDANIEVS 464

  Fly   500 ----QTLPKAADCPKCQSLFYPVDETRSCEDAGIPEHFCTCVPYKRLDTQWAKSIAPK--VIGRI 558
                |:.|... .|:..|||.|:.:.|:|:.|.||..||.|.....:.|.....:...  ::..|
  Fly   465 MKRLQSHPPNR-LPRGISLFLPIPDHRTCDLAHIPSLFCFCRELTEVPTDDGLVLRSSRFMVESI 528

  Fly   559 NEYLA--GRNLSKICSELTLSYIHLTEMKVELDQNFHDDVPRAELGTYRTMFKVKQNSAD--FRA 619
            |:.:.  |:     |.:|.|..:.|.......:::|          .|....:|:.:..:  :.|
  Fly   529 NQLIKPFGQ-----CRQLKLEMVLLAHFLDFGEESF----------VYELRLRVRTSPGNGVYEA 578

  Fly   620 TVIFNNVTDSVEVEVPTISRLDSYENVSTCVKDKTDKMYCIC 661
            ||   .::|.:.:..| |||:..|...|.|:.|...:::|:|
  Fly   579 TV---RLSDVLLLTSP-ISRVSHYLGQSHCIGDPDLQIFCLC 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9988NP_651625.1 DUF229 90..580 CDD:281053 132/542 (24%)
ALP_like 212..493 CDD:293745 82/289 (28%)
CG1428NP_610127.1 DUF229 68..547 CDD:281053 125/513 (24%)
ALP_like 180..453 CDD:293745 82/289 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466456
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JJT
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D31599at6960
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10974
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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