DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10011 and trpa1b

DIOPT Version :9

Sequence 1:NP_651624.2 Gene:CG10011 / 43387 FlyBaseID:FBgn0039590 Length:2119 Species:Drosophila melanogaster
Sequence 2:NP_001007067.1 Gene:trpa1b / 474353 ZFINID:ZDB-GENE-050106-1 Length:1120 Species:Danio rerio


Alignment Length:808 Identity:191/808 - (23%)
Similarity:306/808 - (37%) Gaps:196/808 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1242 LANDGNHQLLERALNACKSPIDLEIEDYNGQTALNIAARNGHLEVVKLLLSFSQPCNDGTGRMKR 1306
            ||..|....::|.:.  |.|..|.:.|.||.:.|:.|:..|:|::::|::|...|          
Zfish    32 LAFKGKASAIDRLIQ--KGPEHLSLRDENGASLLHYASAGGNLDIIRLIVSIVGP---------- 84

  Fly  1307 VDVNHADRDGWTPLRSASWGGHSEVVRLLIAQPACKIDLADKEGRTALRAAAWSGHEDILKLLIE 1371
                                   ||           :::.|::|||.|..|.....:....:|::
Zfish    85 -----------------------EV-----------LNVQDEQGRTPLHWAVEQDQQQSCAVLLD 115

  Fly  1372 SGADVNSVDR--QGRTSLIAASYMGHYDIVEILLENGANVNHLDLD-GRSALCVAALCGSSGYSK 1433
            .|||.|.::.  .|...|.......|  :.|:||......::|:.| |.:.:.:|.   |:...:
Zfish   116 LGADPNILNNALMGPLHLAVTKQYNH--LAEVLLSCDKTNSNLEGDLGNTPVMLAC---SNNNCQ 175

  Fly  1434 VISTLLDHGANTDQLDNDGMSPLLVSSFEGNAEVCELLLENAADPDLA--------DFMGRTPLW 1490
            .:..|:..||.....:..|..|:...:|.|..|..|::|:...:..::        |....|||.
Zfish   176 ALQILIKRGAKMCIQNKLGHYPIHTVAFAGAKEAMEMVLKIGEELGVSSTLHINYLDKSKSTPLH 240

  Fly  1491 AACTAGHATVVKLLLFWGCGIDCMDSEGRTVLSIGAAQGNVETVRQLL---DRGLDETH-RDNAG 1551
            .|...|:..|:||.:..|..::...|...|.|....:||::|.|:.:|   :|..|..: ||.|.
Zfish   241 LAVRGGNIEVIKLCILKGAKVEQHQSGKCTALHFACSQGSLEAVKIMLSSYNRTEDIVNIRDGAN 305

  Fly  1552 WTPLHYAAFEGFHEVC-------------LQLLESGAKIDECDNEGKTALHLAAQEGRLHCVQAL 1603
            .||||.|......|:.             |..|..||:||..|.:|.:.|.||:.......|..|
Zfish   306 RTPLHRATLFDHVELAEYLISKPNTLSLDLICLGKGAEIDSIDCKGLSPLLLASSCSAWKTVAYL 370

  Fly  1604 LDIHSSF-VDQKA-----H-------------------------------DGKTAFRLACLEGHM 1631
            |.|.:.| :.:|.     |                               :|.|....||..|..
Zfish   371 LSIGADFKIKEKTGRNFLHFVILQPKGLKNLPETVLQSTAVKEMLSDEDVEGCTPLHYACKLGIH 435

  Fly  1632 DTVEFLLKFCCDVNSKDADSRTTLYILALENKLEIVKYLLDMTNVD---VNIPDSEGRTALHVAA 1693
            |:|:.:|.....:..|..:.::.|:..|...::.....||: |..|   :|..|.:|.|.||:|:
Zfish   436 DSVKNMLGLNICLGQKSREKKSALHFAAEYGRINTCHRLLE-TLTDSKMLNDWDEKGLTPLHLAS 499

  Fly  1694 WQGHADMVKTLIEAGADVNSMDLEARTPLHSCAWQGNHDVMNILLYYGA-LADHACKQGATALGI 1757
            ..|||.:|..|:..||...| |.:..|.||..|.:|....|.|||.... |.|...:.|.|||.|
Zfish   500 RAGHAQVVDLLLRKGALFQS-DYKGWTCLHHAAAEGYTQTMKILLAANVKLLDEKNEDGNTALHI 563

  Fly  1758 SAQEGHEKCVIALLQFGA--------NPY-----------------KSDHCGRTPIKLAAKSSRT 1797
            :||.||...|:.||..||        |.:                 :.:.|..:.....|| ||.
Zfish   564 AAQAGHVSAVLLLLDRGAEIALNDADNSFLHEAVRNERREVVNATIEHERCDESMTSFKAK-SRC 627

  Fly  1798 SILKIFE------------SYTKNEASNPNEPKFHA--HASMLRSP---------DQPPALPLHQ 1839
            .:|.|.|            ..|::: .:.|...:|.  :...|::|         |:..|.   |
Zfish   628 VVLDIIEFLPESFQHLLDQCITESD-HDANSQDYHIMYNFQWLQAPIQLKKYAKTDKTKAF---Q 688

  Fly  1840 NLAPYPA-----------HASASSVCSAATTATVHNGSHLHVLNASSSTHSSNNFYQNTMQSDTS 1893
            .||...|           |..:........||   .||.:|.||.:.       :....:.....
Zfish   689 PLAALNAMVRYNRLELLIHPLSRKYLEMKWTA---YGSKVHFLNLAI-------YLLGLLPLTYL 743

  Fly  1894 SLHKRKSVISSQSTGSSNDQAPLTFTQQ 1921
            .|:.|.|...|:..|:|....|::|::|
Zfish   744 ILNLRPSQDFSKGNGTSVIMVPVSFSEQ 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10011NP_651624.2 AAA 344..457 CDD:214640
Methylase_S <772..885 CDD:279728
Ank_4 1237..1291 CDD:290365 15/48 (31%)
ANK 1266..1403 CDD:238125 27/138 (20%)
ANK repeat 1270..1313 CDD:293786 9/42 (21%)
Ank_2 1275..1380 CDD:289560 20/104 (19%)
ANK repeat 1315..1347 CDD:293786 2/31 (6%)
ANK repeat 1349..1380 CDD:293786 10/30 (33%)
Ank_2 1354..1449 CDD:289560 21/97 (22%)
ANK repeat 1382..1413 CDD:293786 6/30 (20%)
ANK 1410..1538 CDD:238125 32/136 (24%)
ANK repeat 1415..1446 CDD:293786 7/31 (23%)
Ank_5 1438..1489 CDD:290568 12/58 (21%)
ANK 1479..1604 CDD:238125 41/149 (28%)
ANK repeat 1484..1515 CDD:293786 9/30 (30%)
Ank_2 1489..1581 CDD:289560 32/108 (30%)
ANK repeat 1517..1548 CDD:293786 9/34 (26%)
ANK repeat 1550..1581 CDD:293786 13/43 (30%)
Ank_2 1555..1648 CDD:289560 30/142 (21%)
ANK 1578..1705 CDD:238125 39/166 (23%)
ANK repeat 1617..1648 CDD:293786 8/30 (27%)
Ank_2 1624..1715 CDD:289560 28/93 (30%)
ANK 1645..1771 CDD:238125 44/129 (34%)
ANK repeat 1650..1682 CDD:293786 7/34 (21%)
ANK repeat 1684..1715 CDD:293786 13/30 (43%)
Ank_2 1689..1781 CDD:289560 38/117 (32%)
ANK repeat 1717..1742 CDD:293786 9/24 (38%)
ANK repeat 1750..1775 CDD:293786 12/24 (50%)
trpa1bNP_001007067.1 Ank_2 33..124 CDD:289560 29/136 (21%)
ANK repeat 58..91 CDD:293786 11/76 (14%)
ANK 88..214 CDD:238125 31/130 (24%)
ANK repeat 94..124 CDD:293786 10/29 (34%)
ANK repeat 126..158 CDD:293786 7/33 (21%)
ANK repeat 160..191 CDD:293786 6/33 (18%)
Ank_2 166..261 CDD:289560 22/97 (23%)
ANK repeat 193..232 CDD:293786 7/38 (18%)
ANK 229..371 CDD:238125 41/141 (29%)
ANK repeat 237..265 CDD:293786 9/27 (33%)
ANK repeat 267..302 CDD:293786 9/34 (26%)
Ank_2 272..380 CDD:289560 33/107 (31%)
ANK 345..511 CDD:238125 39/166 (23%)
ANK repeat 350..375 CDD:293786 8/24 (33%)
Ank_2 355..439 CDD:289560 16/83 (19%)
ANK repeat 421..452 CDD:293786 8/30 (27%)
Ank_2 426..515 CDD:289560 25/89 (28%)
ANK repeat 457..488 CDD:293786 7/31 (23%)
ANK 488..605 CDD:238125 41/117 (35%)
ANK repeat 491..520 CDD:293786 13/29 (45%)
Ank_2 495..587 CDD:289560 37/92 (40%)
ANK repeat 522..554 CDD:293786 11/31 (35%)
ANK repeat 556..581 CDD:293786 12/24 (50%)
Ion_trans 803..977 CDD:278921
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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