DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10011 and TrpA1

DIOPT Version :10

Sequence 1:NP_651624.2 Gene:CG10011 / 43387 FlyBaseID:FBgn0039590 Length:2119 Species:Drosophila melanogaster
Sequence 2:NP_001261600.1 Gene:TrpA1 / 39015 FlyBaseID:FBgn0035934 Length:1232 Species:Drosophila melanogaster


Alignment Length:611 Identity:163/611 - (26%)
Similarity:244/611 - (39%) Gaps:128/611 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1173 KSQNIDFELADLLLSSEKSCLMETQRAGSPSEHSEPPAESQDENASSTLHQLSDSHHIELHKGKA 1237
            :.||.||...|              .||:...|.  ..||...:|...|..:.....:...|.:|
  Fly   145 RDQNGDFNAKD--------------NAGNTPLHI--AVESDAYDALDYLLSIPVDTGVLNEKKQA 193

  Fly  1238 LIHILANDGNHQLLERALNACKSPIDLEIEDYNGQTALNIAARNGHLEVVKLLLS-FS----QPC 1297
            .:| ||.:.|.....|.:...::.||::....:|:|||::||...|.|..::|:: |.    :||
  Fly   194 PVH-LATELNKVKSLRVMGQYRNVIDIQQGGEHGRTALHLAAIYDHEECARILITEFDACPRKPC 257

  Fly  1298 NDG-------------------------TGRMKRVDVNHADRDGWTPLRSASWGGHSEVVRLLIA 1337
            |:|                         .|..:...::..|.:|..||.||..||..:.|.|.:.
  Fly   258 NNGYYPIHEAAKNASSKTMEVFFQWGEQRGCTREEMISFYDSEGNVPLHSAVHGGDIKAVELCLK 322

  Fly  1338 QPACKIDLADKEGRTALRAAAWSGHEDILKLL-----IESGADVNSVDRQGRTSLIAASYMGHYD 1397
            ..| ||.....:..|.:..|...|..||:||:     :|....::..|.|..|.|..||...|.|
  Fly   323 SGA-KISTQQHDLSTPVHLACAQGAIDIVKLMFEMQPMEKRLCLSCTDVQKMTPLHCASMFDHPD 386

  Fly  1398 IVEILLENGANVNHLDLDGRSALCVAALCGSSGYSKVISTLLDHGANTDQLD------------N 1450
            ||..|:..||::|.||.:.||.|.:||  ..||: |.:..|:..||.....|            |
  Fly   387 IVSYLVAEGADINALDKEHRSPLLLAA--SRSGW-KTVHLLIRLGACISVKDAAARNVLHFVIMN 448

  Fly  1451 DGMSPLLVSSFEGNAEVCE------LLLENAADPDLADFMGRTPLWAACTAGHATVVKLLLFWGC 1509
            .|.    ::.|......|:      |||..      .|.||.:||..|...||...::.|:..|.
  Fly   449 GGR----LTDFAEQVANCQTQAQLKLLLNE------KDSMGCSPLHYASRDGHIRSLENLIRLGA 503

  Fly  1510 GIDCMDSEGRTVLSIGAAQGNVETVRQLLD--RG---LDETHRDNAGWTPLHYAAFEGFHEVCLQ 1569
            .|:..::...:.|...|..|...|||||||  :|   ::|:  |.||.||||.::.:|...|...
  Fly   504 CINLKNNNNESPLHFAARYGRYNTVRQLLDSEKGSFIINES--DGAGMTPLHISSQQGHTRVVQL 566

  Fly  1570 LLESGAKIDECDNEGKTALHLAAQEGRLHCVQALLDIHSSFVDQKAHDGKTAFRLACLEGHMDTV 1634
            ||..||.:.. |:.|:..|.|||..|....::.|..:||..:||...||.||..||.:|.....:
  Fly   567 LLNRGALLHR-DHTGRNPLQLAAMSGYTETIELLHSVHSHLLDQVDKDGNTALHLATMENKPHAI 630

  Fly  1635 EFLLKFCCDVNSKDADSRTTLYILALENKLEIVKYLLDMTNVDVNIPDSEGRTALHVAAWQGHAD 1699
            ..|:...|                      ::|..:|||:.:|..|.......||.:...:..|:
  Fly   631 SVLMSMGC----------------------KLVYNVLDMSAIDYAIYYKYPEAALAMVTHEERAN 673

  Fly  1700 MVKTLIEAGADVNSMDLEARTPLHSC 1725
            .|..|              |:..|.|
  Fly   674 EVMAL--------------RSDKHPC 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10011NP_651624.2 ANKYR 1236..1489 CDD:440430 82/305 (27%)
ANK repeat 1270..1313 CDD:293786 15/72 (21%)
ANK repeat 1315..1347 CDD:293786 12/31 (39%)
ANK repeat 1349..1380 CDD:293786 8/35 (23%)
ANK repeat 1382..1413 CDD:293786 13/30 (43%)
ANK repeat 1415..1446 CDD:293786 11/30 (37%)
ANKYR 1469..1788 CDD:440430 74/268 (28%)
ANK repeat 1484..1515 CDD:293786 10/30 (33%)
ANK repeat 1517..1548 CDD:293786 12/35 (34%)
ANK repeat 1550..1581 CDD:293786 12/30 (40%)
ANK repeat 1617..1648 CDD:293786 9/30 (30%)
ANK repeat 1650..1682 CDD:293786 6/31 (19%)
ANK repeat 1684..1715 CDD:293786 5/30 (17%)
ANK repeat 1717..1742 CDD:293786 3/9 (33%)
ANK repeat 1750..1775 CDD:293786
TrpA1NP_001261600.1 Ank_2 95..183 CDD:463710 12/53 (23%)
ANK repeat 125..155 CDD:293786 4/9 (44%)
ANKYR 140..461 CDD:440430 88/340 (26%)
ANK repeat 157..199 CDD:293786 11/44 (25%)
ANK repeat 259..298 CDD:293786 2/38 (5%)
ANK repeat 300..330 CDD:293786 12/30 (40%)
ANK repeat 336..369 CDD:293786 8/32 (25%)
ANKYR 368..634 CDD:440430 90/281 (32%)
ANK repeat 374..402 CDD:293786 12/27 (44%)
ANK repeat 404..476 CDD:293786 19/84 (23%)
ANK repeat 478..509 CDD:293786 10/30 (33%)
TRPV 481..1093 CDD:454755 68/244 (28%)
ANK repeat 511..545 CDD:293786 12/35 (34%)
ANK repeat 547..576 CDD:293786 12/28 (43%)
ANK repeat 579..611 CDD:293786 11/31 (35%)
ANK repeat 613..638 CDD:293786 8/24 (33%)
Blue background indicates that the domain is not in the aligned region.

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