DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10011 and Arms

DIOPT Version :10

Sequence 1:NP_651624.2 Gene:CG10011 / 43387 FlyBaseID:FBgn0039590 Length:2119 Species:Drosophila melanogaster
Sequence 2:NP_726059.5 Gene:Arms / 37433 FlyBaseID:FBgn0261554 Length:1642 Species:Drosophila melanogaster


Alignment Length:1073 Identity:254/1073 - (23%)
Similarity:379/1073 - (35%) Gaps:314/1073 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1214 DENASSTLHQLSDSHHIEL----HKGKALIHILANDG----NHQLLERALNACKSPIDLEIEDYN 1270
            |.|..|.|..:.||.|:.:    .....::.::|..|    ..:.|.|.       .|::.||.:
  Fly   178 DNNDISGLRAILDSRHLTIDDRDENATTVLMVVAGRGLTAFVREFLARG-------ADVQAEDLD 235

  Fly  1271 GQTALNIAARNGHLEVVKLLLSFSQPCNDGTGRMKRVDVNHADRDGWTPLRSASWGGHSEVVRLL 1335
            ..|||..|:|||||:||:|||...            .:|.|.|..|||.|..|::.||:|:||||
  Fly   236 NWTALLCASRNGHLDVVQLLLDHG------------AEVEHRDMGGWTSLMWAAYRGHTELVRLL 288

  Fly  1336 IAQPACKIDLADKEGRTALRAAAWS---GHEDILKLLIESGADVNSVDRQGRTSLIAASYMGHYD 1397
            :.:.|.    .:..|...|.|..|:   |::||::||::.||.||..|:.|.|:|:.|...|:.:
  Fly   289 LDKGAD----GNAHGNYHLGALLWAAGRGYKDIVELLVQRGAKVNVGDKYGTTALVWACRRGNVE 349

  Fly  1398 IVEILLENGANVNHLDLDGRSALCVAALCGSSGYSKVISTLLDHGANTDQLDNDGMSPLLVSSFE 1462
            ||:.||:.||||:...:...:.|.|||   :.|::..:|::|:...|.:.||.|||:.|.::|.|
  Fly   350 IVDTLLKAGANVDTAGMYSWTPLLVAA---AGGHTDCVSSILEKKPNVNALDKDGMTALCIASRE 411

  Fly  1463 GNAEVCELLLENAADPDLADFMGRTPLWAACTAGHATVVKLLLFWGCGIDCMDSEGRTVLSIGAA 1527
            |..::...|:...|..::.|....|||..|..|||.|||:.||.....:|....:.:|.:.....
  Fly   412 GFQDIAASLIAAGAYINIQDRGADTPLIHAVKAGHRTVVEALLKKHADVDIQGKDRKTAIYTAVE 476

  Fly  1528 QGNVETVRQLLDRGLDETHRDNAGWTPLHYAAFEGFHEVCLQLLESGAKIDECDNEGKTALHLAA 1592
            :|:...|:.||....|.......|.|||..|......|:...||:..||:...|..|.|.||:|.
  Fly   477 KGHTPIVKLLLATNPDLESATKDGDTPLLRAVRNRNLEIVHLLLDRKAKVTASDKRGDTCLHIAM 541

  Fly  1593 QEGRLHCVQALL--DIHSSFVDQKAHDGKTAFRLACLEGHMDTV--------------------- 1634
            :......|:|||  ..||..:.:....|:|.:.:..|  |..|:                     
  Fly   542 RARSKTIVEALLRNPKHSQLLYRANKAGETPYNIDSL--HQKTILGQVFGARRLNTNEDSEGMLG 604

  Fly  1635 -EFLLKFCCDVNSKDADSRTTLYILALENKLEIVKYLL------DMTNVDVNIPDSEGRTA---- 1688
             |.......||.|:  .:.||...:.|..|....|..|      :|.|......:...||:    
  Fly   605 YELYSSALADVLSE--PTLTTPITVGLYAKWGSGKSFLLNKLRDEMNNFARQWAEPPIRTSGLLF 667

  Fly  1689 ---LHVAAWQGHADMVKT---LIEAGADVNSMDLEARTPLHSCAWQGNHDVMNILLYYGALADHA 1747
               ||||...|....:.|   ::...|.|..:                     :|.|....|...
  Fly   668 IVCLHVALLIGTIVGLSTWSAVVGVSAAVGFL---------------------LLAYLLLAAVRY 711

  Fly  1748 CK-QGATALGISAQEGHEKCVIAL-----LQFGANPYKSDHCGRTPIKL----AAKSSRT----- 1797
            |. |.......|.|.|.||.:..|     :.|...|.........|::.    |..:|.|     
  Fly   712 CNYQMDMQWAYSVQHGLEKRMTRLRLILQVAFCHPPGPQSDSQAKPVRFHFAEANSASPTGDGAV 776

  Fly  1798 -----SILKIFESYTKNEASNPNEPKFHAHASMLRSPDQPPALP----------------LHQNL 1841
                 ::|...||:            :...|:.|....:|..|.                |...|
  Fly   777 AHMLAALLDAIESH------------YGWLATRLYRAFRPKCLKVDVGWRWRRMCCIPIVLIFEL 829

  Fly  1842 APYPAHASASSVCSAATTATVHNGSH----LHVLNASSST------HSSNNFYQNTMQSDTSSLH 1896
            |........|...:..|.|......|    |:|:.|...|      |.....:.:...|....| 
  Fly   830 ALVTVVTGISLTVAYFTFADEKEKEHILVALYVIAAVMGTLICTHLHVLAKVFVSLFTSHIRVL- 893

  Fly  1897 KRKSVISSQSTGSSNDQAPLT------------------FTQQLQR------------------- 1924
             :::|.||:|       ||||                  ||.|..|                   
  Fly   894 -KRAVRSSES-------APLTMLGAEVAVMTDMVKCLDAFTNQQSRLVGVIDALDSCDTERILTL 950

  Fly  1925 ----QSKLSSRNNLMV----------------NSKHA-SSSGAAGH-------------KSSG-- 1953
                |:.|||.|...|                ||:.. :..|..||             ::||  
  Fly   951 LNAVQTLLSSPNRPFVLLISVDPHVIAKAAEANSRRLFTEGGIGGHDFLRNLVHLPVYLQNSGLR 1015

  Fly  1954 ---------------GGGGAQRHSQVLPDLSEHQLASNMTNEADMYDMECMSPLYATPPHSPSSE 2003
                           |||..|....  |.|.....|..::|.:::                    
  Fly  1016 KVQRAQMTALLFKRSGGGDYQTDDG--PTLGHSVSARRLSNASEI-------------------- 1058

  Fly  2004 LSSPGQLPGLNAFVDDERAGTSSGGGAKLPDNHFARDTHMRIILGNLKENQPSSSGKSKRSGVSS 2068
            :||..:|          |.....|||.||                .|.|:..||:| |....:..
  Fly  1059 ISSQEKL----------RGPARGGGGKKL----------------RLSESVASSTG-SNLHRLGQ 1096

  Fly  2069 NPAMRLIRSRF--------DAASQLIRRTNNIL 2093
            ||...|..||.        |...:.:||..|::
  Fly  1097 NPQTVLDLSRIVLTDDYFSDVNPRSMRRLMNVI 1129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10011NP_651624.2 ANKYR 1236..1489 CDD:440430 85/259 (33%)
ANK repeat 1270..1313 CDD:293786 16/42 (38%)
ANK repeat 1315..1347 CDD:293786 13/31 (42%)
ANK repeat 1349..1380 CDD:293786 13/33 (39%)
ANK repeat 1382..1413 CDD:293786 13/30 (43%)
ANK repeat 1415..1446 CDD:293786 8/30 (27%)
ANKYR 1469..1788 CDD:440430 84/364 (23%)
ANK repeat 1484..1515 CDD:293786 13/30 (43%)
ANK repeat 1517..1548 CDD:293786 6/30 (20%)
ANK repeat 1550..1581 CDD:293786 10/30 (33%)
ANK repeat 1617..1648 CDD:293786 9/52 (17%)
ANK repeat 1650..1682 CDD:293786 8/37 (22%)
ANK repeat 1684..1715 CDD:293786 10/40 (25%)
ANK repeat 1717..1742 CDD:293786 2/24 (8%)
ANK repeat 1750..1775 CDD:293786 8/29 (28%)
ArmsNP_726059.5 ANKYR 172..438 CDD:440430 92/285 (32%)
ANK repeat 205..233 CDD:293786 5/34 (15%)
ANK repeat 235..266 CDD:293786 16/42 (38%)
ANK repeat 268..299 CDD:293786 13/34 (38%)
ANK repeat 301..332 CDD:293786 12/30 (40%)
ANKYR 316..598 CDD:440430 88/286 (31%)
ANK repeat 334..362 CDD:293786 12/27 (44%)
ANK repeat 367..398 CDD:293786 8/33 (24%)
ANK repeat 400..431 CDD:293786 9/30 (30%)
ANK repeat 435..464 CDD:293786 13/28 (46%)
ANK repeat 466..497 CDD:293786 6/30 (20%)
ANK repeat 499..530 CDD:293786 10/30 (33%)
KAP_NTPase 605..1136 CDD:462231 117/618 (19%)
SAM_superfamily 1357..1392 CDD:188886
Blue background indicates that the domain is not in the aligned region.

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