DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10011 and zfp1

DIOPT Version :9

Sequence 1:NP_651624.2 Gene:CG10011 / 43387 FlyBaseID:FBgn0039590 Length:2119 Species:Drosophila melanogaster
Sequence 2:XP_017945878.1 Gene:zfp1 / 100493692 XenbaseID:XB-GENE-6465737 Length:507 Species:Xenopus tropicalis


Alignment Length:389 Identity:78/389 - (20%)
Similarity:131/389 - (33%) Gaps:147/389 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 GLKTQPTEDTDGNLEALMQRKVSPDKEVNGLVHSAGVEPNNRIVS----TVYIHREWVLKKIALC 305
            |:..:||:...||.:        ||     |:|       .||:|    .:|:          |.
 Frog     2 GISQEPTDPVMGNQD--------PD-----LLH-------QRILSLTLEIIYL----------LT 36

  Fly   306 LEQRTAGKKSGPVA---------LGGA----ASSSYVSARAKAAAISSSSYNGCLVLGSNGSGKT 357
            .|..|..||||..|         ||||    .:.:..:..|..:|:...:....|.|.||     
 Frog    37 GEGYTVTKKSGDGAPPQTCTDCMLGGACRHHVTPTVGALHAPGSALQKENAKRILELISN----- 96

  Fly   358 SICQAIMKGNSGTKGILNRKLLACYLIESQNPECHSLSLFMRKIVLQLLSHASLISRDESQRIID 422
             |.|.:    :|...|                .|..:||:..      |.....:..::|:.:  
 Frog    97 -IIQLL----TGEVAI----------------RCEDVSLYFS------LEEWQYLKGNKSRYL-- 132

  Fly   423 EGFSFLRDEAQQQEFKLDEAMNNISLSENAE----------ELLIEELKRGASECDTKELDNFQS 477
            ||   :....||.:...::      :..:||          |::.||    .|..::..|.|..:
 Frog   133 EG---MEGSVQQTDCPKED------VGSDAEPLWYRDREFPEIVAEE----PSLWESPTLPNTPT 184

  Fly   478 QRTSTVNKAAR---------------TTLTRQQSEPAPLQAMDAVNSDEKTGSNYGTHPPKRASR 527
            ......|:.:|               ..||||.. |.|     ..|.::...          ||.
 Frog   185 APQRPPNRISRGFNEELAAWGRGKGSDPLTRQMG-PDP-----CTNPNDSLS----------ASI 233

  Fly   528 ERGDTEQDKDMGSEKEQKQSQ-------EPKE---TPKSSPAKSKSKIPVKRGRSGSGVLSPSK 581
            ...|.::::|  |.:|.|:|.       ||.|   .|:||...:.|.:.:....:.|..::|::
 Frog   234 LLRDIKEEED--SWEEGKESDFSIVTVTEPMEEMPDPESSANNTFSSVTISELETTSFQVAPNR 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10011NP_651624.2 AAA 344..457 CDD:214640 20/122 (16%)
Methylase_S <772..885 CDD:279728
Ank_4 1237..1291 CDD:290365
ANK 1266..1403 CDD:238125
ANK repeat 1270..1313 CDD:293786
Ank_2 1275..1380 CDD:289560
ANK repeat 1315..1347 CDD:293786
ANK repeat 1349..1380 CDD:293786
Ank_2 1354..1449 CDD:289560
ANK repeat 1382..1413 CDD:293786
ANK 1410..1538 CDD:238125
ANK repeat 1415..1446 CDD:293786
Ank_5 1438..1489 CDD:290568
ANK 1479..1604 CDD:238125
ANK repeat 1484..1515 CDD:293786
Ank_2 1489..1581 CDD:289560
ANK repeat 1517..1548 CDD:293786
ANK repeat 1550..1581 CDD:293786
Ank_2 1555..1648 CDD:289560
ANK 1578..1705 CDD:238125
ANK repeat 1617..1648 CDD:293786
Ank_2 1624..1715 CDD:289560
ANK 1645..1771 CDD:238125
ANK repeat 1650..1682 CDD:293786
ANK repeat 1684..1715 CDD:293786
Ank_2 1689..1781 CDD:289560
ANK repeat 1717..1742 CDD:293786
ANK repeat 1750..1775 CDD:293786
zfp1XP_017945878.1 KRAB_A-box 107..141 CDD:383038 8/60 (13%)
COG5048 <262..469 CDD:227381 7/34 (21%)
C2H2 Zn finger 324..344 CDD:275368
C2H2 Zn finger 352..372 CDD:275368
C2H2 Zn finger 380..400 CDD:275368
C2H2 Zn finger 408..428 CDD:275368
C2H2 Zn finger 436..456 CDD:275368
C2H2 Zn finger 464..484 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1115202at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.