DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb98DE and Rbm31y

DIOPT Version :9

Sequence 1:NP_524543.1 Gene:Hrb98DE / 43385 FlyBaseID:FBgn0001215 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_083246.1 Gene:Rbm31y / 74484 MGIID:1921734 Length:565 Species:Mus musculus


Alignment Length:519 Identity:115/519 - (22%)
Similarity:170/519 - (32%) Gaps:209/519 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 DDFPQDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSH 81
            :.|..|:....:...|:|||||....:.:.|..:..|:|.|:|.::..||.|..||||||:.:..
Mouse    19 EGFKIDATKNQQDASKMFIGGLSQEMSKQVLLEYLSKFGEIIDFIIKTDPNTGLSRGFGFVLFKD 83

  Fly    82 SSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDS--PNAGATVKKLFVGALKDDHDEQSIRDYFQH 144
            |:.:::..:.:.||:||:.:|.|||   :.::|  ||     ||:|||.|.....|:.||.||..
Mouse    84 SATVEKVLQVKDHKVDGKKIEFKRA---KALESQFPN-----KKIFVGGLNPRLSEEKIRAYFGT 140

  Fly   145 FGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPK--------- 200
            ||.|..|.:.:..:|.::|.|.|:::.|.:.|.||:..:.|.:.....:||.|.||         
Mouse   141 FGQIEAIELPLCSDTRERRAFGFIKYMDENSVRKVLENRYHFIGSSRCEVKMAYPKENPARQLSK 205

  Fly   201 ------------------QNDQQGGG--------------------------------------- 208
                              :|:.:|||                                       
Mouse   206 RKAIAKDRTRKSVPAVELENNWRGGGSPSFHIMANSEAQEANQDAHRAGSYTSRANSDVTLTNAC 270

  Fly   209 GGRGGPGG----------------------RAGGNR----------------------GNMGG-- 227
            |.|..|..                      |:..|.                      |.:..  
Mouse   271 GFRDSPNAFHVNSNVFVTNSTTFIASSNALRSSTNTVGVSHYTLDANPNTFLASQYTLGTISNTL 335

  Fly   228 -------GNYGNQNGGGNWNNGG--NNWGNNR-----GGNDNWGN--------NSFGGG----GG 266
                   |.|.|..|...:....  |.:|.|:     ..|..|.|        ::||.|    |.
Mouse   336 RTSQYTLGTYPNALGVSQYALAAYPNTFGINQYPLEADQNAFWTNQYPLGTYSDAFGIGQYASGT 400

  Fly   267 GGGGYGGGNNSWGNN-------------NP---WDN----------------------------- 286
            ...|:|....|.|.|             ||   |.|                             
Mouse   401 SPNGFGVSQYSLGTNADTFRTNCFALVANPYNIWTNHYVLATNPNVFRTSQYVLGENPNAFESSQ 465

  Fly   287 ---GNGGGNFGGGGNNWNNGGNDFGGYQQNYGGGPQRGG-------GNFNN--NRMQPYQGGGG 338
               |....|||...:|:...||..|    ..|.|...||       |||.|  |.:..:|...|
Mouse   466 YSVGATQNNFGPNQHNFGANGNFCG----TVGRGGSTGGLNFSQVYGNFLNVCNTLPGFQDSNG 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb98DENP_524543.1 RRM1_hnRNPA_like 32..109 CDD:241022 29/76 (38%)
RRM_SF 123..195 CDD:302621 23/71 (32%)
Rbm31yNP_083246.1 RRM_SF 35..108 CDD:302621 26/72 (36%)
RRM_SF 119..193 CDD:302621 25/73 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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