DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb98DE and Dazap1

DIOPT Version :9

Sequence 1:NP_524543.1 Gene:Hrb98DE / 43385 FlyBaseID:FBgn0001215 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001365924.1 Gene:Dazap1 / 70248 MGIID:1917498 Length:407 Species:Mus musculus


Alignment Length:441 Identity:116/441 - (26%)
Similarity:168/441 - (38%) Gaps:133/441 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 NSNGHDDDFPQDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFG 75
            ||.|.|:            :.|||:||||:.||.|.|:::|.::|.:||.|:|||..|.:|||||
Mouse     2 NSAGADE------------IGKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFG 54

  Fly    76 FITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPR---QDIDSPNAG---------ATVKKLFVGA 128
            |:.:...:.:.....||||.:|||.::||...||   .:...|..|         :...|:|||.
Mouse    55 FVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGG 119

  Fly   129 LKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVD 193
            :..:..|..:|:||:.||.:.::.::.|.|..:.|||.|:.|:|...||:.|....|.:.||.|:
Mouse   120 IPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVE 184

  Fly   194 VKKALPKQNDQQGGGGGRGGPGGRAGGNRGNMGGGNYGNQNGGGNWNNGGN---NWGNNRGGNDN 255
            ||:|.|:.:..|    ..|.||....|:|......|        .|  .|.   .|....|....
Mouse   185 VKRAEPRDSKNQ----APGQPGASQWGSRVAPSAAN--------GW--AGQPPPTWQQGYGPQGM 235

  Fly   256 W--GNNSFGGGG----GGG-----------------GGY---GGGNNSWGNNNPWDNGNGG---- 290
            |  ...:.||.|    |.|                 ||:   .|....:|....:..|.|.    
Mouse   236 WVPAGQAIGGYGPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGPPPPP 300

  Fly   291 ----------------------------------------------GNFGGGGNNWNNGGNDFGG 309
                                                          |.:.|.|.:.:..|..|..
Mouse   301 PDQFAPPGVPPPPATPGAAPLAFPPPPSQAAPDMSKPPTAQPDFPYGQYAGYGQDLSGFGQGFSD 365

  Fly   310 YQQ---NYGGGPQRGGGNFNNNRMQPYQGGGGFKAGGGNQGNYGGNNQGFN 357
            ..|   :|||....|.|.       |..||.||..|..:      |.|||:
Mouse   366 PSQQPPSYGGPSVPGSGG-------PPAGGSGFGRGQNH------NVQGFH 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb98DENP_524543.1 RRM1_hnRNPA_like 32..109 CDD:241022 35/76 (46%)
RRM_SF 123..195 CDD:302621 25/71 (35%)
Dazap1NP_001365924.1 RRM1_DAZAP1 11..92 CDD:409988 37/80 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 74..117 10/42 (24%)
RRM2_DAZAP1 111..190 CDD:409765 28/78 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48027
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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