DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb98DE and SRSF7

DIOPT Version :10

Sequence 1:NP_524543.1 Gene:Hrb98DE / 43385 FlyBaseID:FBgn0001215 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001026854.1 Gene:SRSF7 / 6432 HGNCID:10789 Length:238 Species:Homo sapiens


Alignment Length:88 Identity:23/88 - (26%)
Similarity:41/88 - (46%) Gaps:18/88 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 KLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDD-YDPVDKVVLQKQHQ 186
            |::||.|.....:..:...|.::|.:..:.|..:..     |||||||:| .|..|.|     ..
Human    12 KVYVGNLGTGAGKGELERAFSYYGPLRTVWIARNPP-----GFAFVEFEDPRDAEDAV-----RG 66

  Fly   187 LNGKM-------VDVKKALPKQN 202
            |:||:       |::...:|:::
Human    67 LDGKVICGSRVRVELSTGMPRRS 89

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb98DENP_524543.1 RRM1_hnRNPA_like 32..109 CDD:409992
RRM_SF 123..195 CDD:473069 22/79 (28%)
SRSF7NP_001026854.1 RRM_SRSF7 12..88 CDD:410050 23/85 (27%)
Sufficient for interaction with NXF1 81..98 1/9 (11%)
zf-CCHC 104..119 CDD:395050
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 123..238
6 X 8 AA repeats of R-R-S-R-S-X-S-X 153..226
Blue background indicates that the domain is not in the aligned region.

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