Protein Alignment Hrb98DE and CG34354

DIOPT Version :10

• Sequence 1: NP_524543.1
• Gene: Hrb98DE / 43385
• FlyBaseID: FBgn0001215
• Length: 365
• Species: Drosophila melanogaster
• Sequence 2: NP_001097953.2
• Gene: CG34354 / 5740528
• FlyBaseID: FBgn0085383
• Length: 550
• Species: Drosophila melanogaster
• Alignment Length: 264
• Identity: 61/264 - (23%)
• Similarity: 103/264 - (39%)
• Gaps: 42/264 - (15%)

  Fly     3 NSNQNQNGNSNGHDDDFPQDSI---TEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMK 64
            :|.|.|....:.......|..:   ::||... :|:|.|......:.||..|..:|.|.|..|::
  Fly    66 HSQQQQQQQMSQQQQQQQQQLVGNNSKPEQFH-IFVGDLSAEIETQQLKDAFTPFGEISDCRVVR 129

  Fly    65 DPRTKRSRGFGFITYSHSSMIDEAQKSRPHK-IDGRVVEPK---RAVPRQDIDSPNAGATVKKLF 125
            ||:|.:|:|:||:::...|..:.|..:...: :..|.:...   |..|....|......|..:::
  Fly   130 DPQTLKSKGYGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVY 194

  Fly   126 ---------------VGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYD- 174
                           .|||....:|:.::..|..:|.|.:|.:..||      |:|||.|...:
  Fly   195 NQSSPTNCTVYCGGINGALSGFLNEEILQKTFSPYGTIQEIRVFKDK------GYAFVRFSTKEA 253

  Fly   175 PVDKVVLQKQHQLNGKMVDVKKALPKQNDQ-------QGGGGGRGGPGGRAGGNRGNMGGGNYGN 232
            ....:|.....::|.:  .||.|..|::..       .||...:|.|.|.|.   .......||.
  Fly   254 ATHAIVAVNNTEINQQ--PVKCAWGKESGDPNHMSAIAGGALAQGFPFGSAA---AAAAAAAYGQ 313

  Fly   233 QNGG 236
            |..|
  Fly   314 QVAG 317

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb98DE	NP_524543.1	RRM1_hnRNPA_like	32..109	CDD:409992	21/80 (26%)
		RRM_SF	123..195	CDD:473069	17/87 (20%)
CG34354	NP_001097953.2	PABP-1234	<90..420	CDD:130689	57/240 (24%)
		RRM2_TIA1_like	97..171	CDD:409789	20/74 (27%)
		RRM3_TIA1_like	202..276	CDD:409790	20/81 (25%)