DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb98DE and dazap1

DIOPT Version :9

Sequence 1:NP_524543.1 Gene:Hrb98DE / 43385 FlyBaseID:FBgn0001215 Length:365 Species:Drosophila melanogaster
Sequence 2:XP_021335308.1 Gene:dazap1 / 561459 ZFINID:ZDB-GENE-070212-1 Length:469 Species:Danio rerio


Alignment Length:357 Identity:96/357 - (26%)
Similarity:138/357 - (38%) Gaps:102/357 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 EHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSR 92
            :.:.|||:||||:.||.|.|:.:|.::|.:||.|:|||..|.:||||||:.:...:.:.....::
Zfish    20 DEIGKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDTK 84

  Fly    93 PHKIDGRVVEPKRAVPR---------------QDIDSPNAGATVKKLFVGALKDDHDEQSIRDYF 142
            ||.:|||.::||...||               ...||..:    ||:|||.:..:..|..:||||
Zfish    85 PHNLDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKS----KKIFVGGIPHNCGEAELRDYF 145

  Fly   143 QHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQQGG 207
            ..||.:.::.::.|.|..:.|||.|:.|:....||:.|....|.:.||.|:||||.|:.:.....
Zfish   146 NRFGVVTEVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPRDSKAPAP 210

  Fly   208 GGGRGGPGGRAGGNRGNMGGGNYGNQNGGGNWN-----NGGNNWGNNRGGNDNWGNNSFGGGGGG 267
            |                        |.|...|.     :..|.|.....  ..| ..|:|..|  
Zfish   211 G------------------------QLGANQWGPRAIISAANGWAAQPA--PTW-QQSYGPQG-- 246

  Fly   268 GGGYGGGNNSWGNNNPWDNGNGGGNFGGGGNNWNNGGNDFGGYQQNYGGGPQRGGGNFNNNRMQP 332
                                           .|.:.|....||      ||....|     |..|
Zfish   247 -------------------------------VWVSTGQPLAGY------GPPLPAG-----RGAP 269

  Fly   333 YQGGGGFKA-------GGGNQGNYGGNNQGFN 357
            .|....|.|       .||.....|...|||:
Zfish   270 AQAPSPFNAFLVAAPPTGGFGAPQGYPQQGFS 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb98DENP_524543.1 RRM1_hnRNPA_like 32..109 CDD:241022 33/76 (43%)
RRM_SF 123..195 CDD:302621 25/71 (35%)
dazap1XP_021335308.1 RRM1_DAZAP1 24..105 CDD:241018 35/80 (44%)
RRM2_DAZAP1 127..202 CDD:240773 28/74 (38%)
FtsK <220..>430 CDD:332908 24/129 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48027
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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