DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb98DE and Hrb87F

DIOPT Version :9

Sequence 1:NP_524543.1 Gene:Hrb98DE / 43385 FlyBaseID:FBgn0001215 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_001163602.1 Gene:Hrb87F / 48535 FlyBaseID:FBgn0004237 Length:385 Species:Drosophila melanogaster


Alignment Length:396 Identity:252/396 - (63%)
Similarity:284/396 - (71%) Gaps:51/396 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QNGNSNGHDDDFPQDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSR 72
            :..:|||:.||  .:.|||||.:||||||||||||||:.||||||||||||||||||||:|||||
  Fly     3 EQNDSNGNYDD--GEEITEPEQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSR 65

  Fly    73 GFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQS 137
            ||||||||.|.|||.||.:||||||||.||||||||||:||||||||||||||||.|:|||||:.
  Fly    66 GFGFITYSQSYMIDNAQNARPHKIDGRTVEPKRAVPRQEIDSPNAGATVKKLFVGGLRDDHDEEC 130

  Fly   138 IRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQN 202
            :|:||:.||.||.:|||.||:|||||||||:||||||||||::|||.|.:..|.:|||||:.||:
  Fly   131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQD 195

  Fly   203 -DQQGGGGGRGGP--GGRAG-GNRGNMGGGNYG---NQNGGGNWN--NGGNNWGNNRGGNDNWGN 258
             |:||||||||||  |||.| |:|| .|||.:|   .|||||||.  .||..:||: |||     
  Fly   196 MDRQGGGGGRGGPRAGGRGGQGDRG-QGGGGWGGQNRQNGGGNWGGAGGGGGFGNS-GGN----- 253

  Fly   259 NSFGGGGGGG-------GGYGGG--NNSWGNNNPWDNGNGGGNFGGGGNNWNNGGNDFGG----- 309
              ||||.|||       ||.|||  ||..|.|..| ||.|||.:|||.:|.:.|||..||     
  Fly   254 --FGGGQGGGSGGWNQQGGSGGGPWNNQGGGNGGW-NGGGGGGYGGGNSNGSWGGNGGGGGGGGG 315

  Fly   310 ----YQQNYGGGPQRGGGNFNNNRMQPYQ---GGGGFKAG--GGNQG------NYGGNNQGFNNG 359
                |||:||||||| ..||.|||..||.   |||||..|  ||.||      |.||..||.|.|
  Fly   316 FGNEYQQSYGGGPQR-NSNFGNNRPAPYSQGGGGGGFNKGNQGGGQGFAGNNYNTGGGGQGGNMG 379

  Fly   360 GNNRRY 365
            |.||||
  Fly   380 GGNRRY 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb98DENP_524543.1 RRM1_hnRNPA_like 32..109 CDD:241022 67/76 (88%)
RRM_SF 123..195 CDD:302621 48/71 (68%)
Hrb87FNP_001163602.1 RRM1_hnRNPA_like 25..102 CDD:241022 67/76 (88%)
RRM_SF 116..188 CDD:302621 48/71 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451302
Domainoid 1 1.000 101 1.000 Domainoid score I6875
eggNOG 1 0.900 - - E33208_3BA81
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 242 1.000 Inparanoid score I1071
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG46466
OrthoDB 1 1.010 - - D1202220at2759
OrthoFinder 1 1.000 - - FOG0000779
OrthoInspector 1 1.000 - - otm25603
orthoMCL 1 0.900 - - OOG6_103644
Panther 1 1.100 - - P PTHR48027
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2767
SonicParanoid 1 1.000 - - X431
1312.840

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