DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb98DE and Slirp

DIOPT Version :10

Sequence 1:NP_524543.1 Gene:Hrb98DE / 43385 FlyBaseID:FBgn0001215 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_081234.2 Gene:Slirp / 380773 MGIID:1916394 Length:112 Species:Mus musculus


Alignment Length:65 Identity:20/65 - (30%)
Similarity:36/65 - (55%) Gaps:4/65 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 IRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVK----KAL 198
            :|::|..||::....:..|||||..||..:|:|...:.:...:.|:.|.::|..:.|:    |||
Mouse    35 LREHFAQFGHVRRCTVPFDKETGFHRGMGWVQFSSQEELQNALQQEHHIIDGVKIHVQAQRAKAL 99

  Fly   199  198
            Mouse   100  99

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb98DENP_524543.1 RRM1_hnRNPA_like 32..109 CDD:409992
RRM_SF 123..195 CDD:473069 16/56 (29%)
SlirpNP_081234.2 RRM_SLIRP 21..92 CDD:409688 16/56 (29%)
Blue background indicates that the domain is not in the aligned region.

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