Protein Alignment Hrb98DE and Secp43

DIOPT Version :10

• Sequence 1: NP_524543.1
• Gene: Hrb98DE / 43385
• FlyBaseID: FBgn0001215
• Length: 365
• Species: Drosophila melanogaster
• Sequence 2: NP_608837.2
• Gene: Secp43 / 33652
• FlyBaseID: FBgn0031607
• Length: 336
• Species: Drosophila melanogaster
• Alignment Length: 217
• Identity: 52/217 - (23%)
• Similarity: 92/217 - (42%)
• Gaps: 31/217 - (14%)

  Fly    32 KLFIGGLDYRTTDENLKAHFEKWG-NIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQKSRPHK 95
            :|::|.|:...|:..:.|.|.|.| :...|.:|::..|....|:.|:.:    :.|:......||
  Fly     7 QLWMGSLESYMTENFIIAAFRKMGEDPTTVRLMRNKYTGEPAGYCFVNF----ISDDHALDAMHK 67

  Fly    96 IDGRVVEPKRAVPRQDIDSPNAGATVK--------KLFVGALKDDHDEQSIRDYF-QHFGNIVDI 151
            ::|:.:.....:.|..::|  |..:.|        .::||.|..|.|:..:...| ..|.:|...
  Fly    68 LNGKPIPGTNPIVRFRLNS--ASNSYKLPGNEREFSVWVGDLSSDVDDYQLYKVFSSKFTSIKTA 130

  Fly   152 NIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQ--HQLNG------KMVDVKKALPKQNDQQGGG 208
            .:::| ..|..:|:.||.|...|.      ||.  :.:||      |.:.:..|:||...:.||.
  Fly   131 KVILD-SLGFSKGYGFVRFGIEDE------QKSALYDMNGYIGLGTKPIKICNAVPKPKSELGGA 188

  Fly   209 GGRGGPGGRAGGNRGNMGGGNY 230
            .|.|......|......||.:|
  Fly   189 VGEGNTNYGYGSGMTAAGGTDY 210

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Hrb98DE	NP_524543.1	RRM1_hnRNPA_like	32..109	CDD:409992	17/77 (22%)
		RRM_SF	123..195	CDD:473069	20/80 (25%)
Secp43	NP_608837.2	RRM1_SECp43	7..90	CDD:410022	20/88 (23%)
		RRM2_SECp43_like	99..178	CDD:409781	20/85 (24%)
		Trnau1ap	210..330	CDD:465438	1/1 (100%)