DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hrb98DE and HNRNPA2B1

DIOPT Version :9

Sequence 1:NP_524543.1 Gene:Hrb98DE / 43385 FlyBaseID:FBgn0001215 Length:365 Species:Drosophila melanogaster
Sequence 2:NP_112533.1 Gene:HNRNPA2B1 / 3181 HGNCID:5033 Length:353 Species:Homo sapiens


Alignment Length:348 Identity:173/348 - (49%)
Similarity:222/348 - (63%) Gaps:30/348 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDEAQK 90
            |.|..||||||||.:.||:|:|:.::|:||.:.|.|||:||.:||||||||:|:|..:.:|.|..
Human    16 EKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA 80

  Fly    91 SRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVI 155
            :|||.||||||||||||.|::...|.|..||||||||.:|:|.:|..:||||:.:|.|..|.|:.
Human    81 ARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIIT 145

  Fly   156 DKETGKKRGFAFVEFDDYDPVDKVVLQKQHQLNGKMVDVKKALPKQNDQ--QGGGGGRGGPGGRA 218
            |:::||||||.||.|||:|||||:||||.|.:||...:|:|||.:|..|  |....||||..| .
Human   146 DRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQEVQSSRSGRGGNFG-F 209

  Fly   219 GGNRGNMGGGNYGNQNGGGNWNNGGNNWGNNRGGNDNWGNNSFGGGGGGGG-----GYGGGNNSW 278
            |.:||  ||||:| ...|.|:..|.:.:|:.||..|  |.|.:|||.|||.     |||||...:
Human   210 GDSRG--GGGNFG-PGPGSNFRGGSDGYGSGRGFGD--GYNGYGGGPGGGNFGGSPGYGGGRGGY 269

  Fly   279 GNNNPWDNGNGGGNFGGGGNNWNNGG------NDFGGYQQ---NYGGGPQRGGGNFNNNRMQ--P 332
            |...| ..||.||.:|||.:|:..|.      ||||.|.|   ||  ||.: .|||..:|..  |
Human   270 GGGGP-GYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNY--GPMK-SGNFGGSRNMGGP 330

  Fly   333 YQGGGGFKAGG-GNQGNYGGNNQ 354
            | |||.:..|| |..|.|||.::
Human   331 Y-GGGNYGPGGSGGSGGYGGRSR 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hrb98DENP_524543.1 RRM1_hnRNPA_like 32..109 CDD:241022 47/76 (62%)
RRM_SF 123..195 CDD:302621 40/71 (56%)
HNRNPA2B1NP_112533.1 Nuclear localization signal. /evidence=ECO:0000255 9..15
RRM1_hnRNPA2B1 19..99 CDD:410155 48/79 (61%)
RRM2_hnRNPA2B1 112..191 CDD:409995 45/78 (58%)
Disordered. /evidence=ECO:0000269|PubMed:26544936 193..353 72/171 (42%)
HnRNPA1 302..326 CDD:402981 12/26 (46%)
Nuclear targeting sequence. /evidence=ECO:0000250 308..347 18/42 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I6828
eggNOG 1 0.900 - - E33208_3BA81
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 360 1.000 Inparanoid score I2209
Isobase 1 0.950 - 0 Normalized mean entropy S742
OMA 1 1.010 - - QHG46466
OrthoDB 1 1.010 - - D1202220at2759
OrthoFinder 1 1.000 - - FOG0000779
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103644
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2767
SonicParanoid 1 1.000 - - X431
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1413.720

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